RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 MMRN2Q9H8L6 949 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 AGO4Q9HCK5 861 aaKnown RBP2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 OBP2BQ9NPH6 170 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 KLC4Q9NSK0 619 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SERTAD4Q9NUC0 356 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 FOXJ2Q9P0K8 574 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 DNAJB11Q9UBS4 358 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SERTAD3Q9UJW9 196 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 HPSEQ9Y251 543 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 SNX14Q9Y5W7 946 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 FER1L4A9Z1Z3 1794 aa2.28□□□□□ -2.04
NUCKS1-202ENST00000464938 ARID4BQ4LE39 1312 aaPredicted RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SALL3Q9BXA9 1300 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 A1L4Q6 167 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 LGALS16A8MUM7 142 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 PODXLO00592 558 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 PCDH17O14917 1159 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SRGAP2O75044 1071 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 COQ9O75208 318 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SKAP2O75563 359 aaPredicted RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 RASAL1O95294 804 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 GLP2RO95838 553 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ONECUT2O95948 504 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 RHOP08100 348 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 PDHA1P08559 390 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 IL6RP08887 468 aaPredicted RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ELFN1P0C7U0 828 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 HKR1P10072 659 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ITGAMP11215 1152 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 HGFP14210 728 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 IDEP14735 1019 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 JUPP14923 745 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 NPPBP16860 134 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 MAKP20794 623 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ITPKBP27987 946 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 LIPAP38571 399 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 HALP42357 657 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 GRK6P43250 576 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 GATMP50440 423 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SEC24CP53992 1094 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 PNLIPRP1P54315 467 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 PRKAG1P54619 331 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SATB1Q01826 763 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 NSUN2Q08J23 767 aaKnown RBP eCLIP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 BLMHQ13867 455 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 BMPR2Q13873 1038 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 STARD3Q14849 445 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 PTPAQ15257 358 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 TXNRD1Q16881 649 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 LY6KQ17RY6 165 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 TRIM60Q495X7 471 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 PREPLQ4J6C6 727 aaPredicted RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 GORABQ5T7V8 394 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ZNF618Q5T7W0 954 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 FAXCQ5TGI0 409 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 CACHD1Q5VU97 1274 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SLC9A4Q6AI14 798 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 KCNV1Q6PIU1 500 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 Q6ZNX1 250 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 USP51Q70EK9 711 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 CERS3Q8IU89 383 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 VRK3Q8IV63 474 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SPARTQ8N0X7 666 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 METTL25Q8N6Q8 603 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 AMER2Q8N7J2 671 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ZNF527Q8NB42 609 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 B3GALNT2Q8NCR0 500 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 CCDC150Q8NCX0 1101 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 OR1N1Q8NGS0 311 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 FAM71BQ8TC56 605 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SMCR8Q8TEV9 937 aaPredicted RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 TMEM171Q8WVE6 324 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 OSCP1Q8WVF1 389 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 LARP4BQ92615 738 aaKnown RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 GLG1Q92896 1179 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 MUL1Q969V5 352 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 FKBP10Q96AY3 582 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 PDLIM2Q96JY6 352 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ZBTB45Q96K62 511 aaPredicted RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 HAPLN3Q96S86 360 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 RMDN3Q96TC7 470 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 NUDT22Q9BRQ3 303 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 C17orf80Q9BSJ5 609 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ISCA1Q9BUE6 129 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 ALG8Q9BVK2 526 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 VN1R3Q9BXE9 311 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 TMEM120AQ9BXJ8 343 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 TPSD1Q9BZJ3 242 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 INO80BQ9C086 356 aaPredicted RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 TP63Q9H3D4 680 aaPredicted RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 HELLSQ9NRZ9 838 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 EHD3Q9NZN3 535 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 TMOD4Q9NZQ9 345 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 DKK3Q9UBP4 350 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 RIMKLBQ9ULI2 386 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 SCAF8Q9UPN6 1271 aaKnown RBP2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 CEP83Q9Y592 693 aa2.27□□□□□ -2.05
NUCKS1-202ENST00000464938 GXYLT2A0PJZ3 443 aa2.26□□□□□ -2.05
NUCKS1-202ENST00000464938 AQP12BA6NM10 295 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms