RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 TRPM5Q9NZQ8 1165 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 ERI2A8K979 691 aaKnown RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 KLHL2O95198 593 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 DLGAP3O95886 979 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 ALDH2P05091 517 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 GEMP55040 296 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 SLFN11Q7Z7L1 901 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 POMGNT2Q8NAT1 580 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 RIN2Q8WYP3 895 aaPredicted RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 PIH1D1Q9NWS0 290 aaKnown RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 CYP39A1Q9NYL5 469 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 EGFRP00533 1210 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 TARSP26639 723 aaKnown RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 MDH1P40925 334 aaKnown RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 SOX10P56693 466 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 FAM111AQ96PZ2 611 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 HNRNPRO43390 633 aaKnown RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 KCNA3P22001 575 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 STIP1P31948 543 aaKnown RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 PPIL6Q8IXY8 311 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 ZNF786Q8N393 782 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 NBPF15Q8N660 670 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 ARRDC4Q8NCT1 418 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 KIF2CQ99661 725 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 RUSC1Q9BVN2 902 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 TMEM120BA0PK00 339 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 CCNT2O60583 730 aaKnown RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 HIRAP54198 1017 aaPredicted RBP14.23□□□□□ -0.13
LRCH3-206ENST00000438796 NBPF9Q3BBW0 867 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 DNAL1Q4LDG9 190 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 DENND1BQ6P3S1 775 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 TPD52L3Q96J77 140 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 PNMA5Q96PV4 448 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 SNTG2Q9NY99 539 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 SH3BP4Q9P0V3 963 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 BLOC1S6Q9UL45 172 aa14.23□□□□□ -0.13
LRCH3-206ENST00000438796 ATP6V1B2P21281 511 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 NOS3P29474 1203 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 HDDC2Q7Z4H3 204 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 ATG4AQ8WYN0 398 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 OSBPL6Q9BZF3 934 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 ATXN3LQ9H3M9 355 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 RNF19AQ9NV58 838 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 QRICH2Q9H0J4 1663 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 A0A1W2PQC6 194 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 AGTP01019 485 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 MRNIPQ6NTE8 343 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 CLYBLQ8N0X4 340 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 MPP6Q9NZW5 540 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 PDZK1P1A8MUH7 402 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 CHURC1-FNTBB4DL54 471 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 MT-CO1P00395 513 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 CSTF3Q12996 717 aaKnown RBP14.22□□□□□ -0.13
LRCH3-206ENST00000438796 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 RNASE11Q8TAA1 199 aaKnown RBP14.22□□□□□ -0.13
LRCH3-206ENST00000438796 MDM1Q8TC05 714 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 DNAJB3Q8WWF6 145 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 EMILIN2Q9BXX0 1053 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 TMCC3Q9ULS5 477 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 USP15Q9Y4E8 981 aaPredicted RBP14.22□□□□□ -0.13
LRCH3-206ENST00000438796 TRIM49D1C9J1S8 452 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 LTFP02788 710 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 CLIP3Q96DZ5 547 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 CELF6Q96J87 481 aaKnown RBP14.22□□□□□ -0.13
LRCH3-206ENST00000438796 ROGDIQ9GZN7 287 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 GBA2Q9HCG7 927 aaPredicted RBP14.22□□□□□ -0.13
LRCH3-206ENST00000438796 STMN3Q9NZ72 180 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 ZNF23P17027 643 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 NT5C2P49902 561 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 GLMNQ92990 594 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 KCNK16Q96T55 309 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 THAP2Q9H0W7 228 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 SETD4Q9NVD3 440 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 UBQLN1Q9UMX0 589 aaKnown RBP14.22□□□□□ -0.13
LRCH3-206ENST00000438796 POLR1DQ9Y2S0 133 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 CDY2AQ9Y6F7 541 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 CDY1Q9Y6F8 540 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 PNPLA7Q6ZV29 1317 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 SLC2A3P11169 496 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 RASA1P20936 1047 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 ACAD10Q6JQN1 1059 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 JAMLQ86YT9 394 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 EPN3Q9H201 632 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 SLC9A8Q9Y2E8 581 aa14.22□□□□□ -0.13
LRCH3-206ENST00000438796 SRGNP10124 158 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 NAB2Q15742 525 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 USP13Q92995 863 aaPredicted RBP14.21□□□□□ -0.13
LRCH3-206ENST00000438796 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 SAMD9LQ8IVG5 1584 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 EIF3DO15371 548 aaKnown RBP eCLIP14.21□□□□□ -0.13
LRCH3-206ENST00000438796 CCR4P51679 360 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 GEMIN4P57678 1058 aaKnown RBP14.21□□□□□ -0.13
LRCH3-206ENST00000438796 SCARA3Q6AZY7 606 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 TYW3Q6IPR3 259 aaKnown RBP14.21□□□□□ -0.13
LRCH3-206ENST00000438796 FAM172AQ8WUF8 416 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 ENTPD3O75355 529 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 KLRC1P26715 233 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 BTN2A1Q7KYR7 527 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 LRRC8DQ7L1W4 858 aa14.21□□□□□ -0.13
LRCH3-206ENST00000438796 DEFB132Q7Z7B7 95 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms