RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FAM183BPQ6ZVS7 135 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 RYBPQ8N488 228 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 ZFP42Q96MM3 310 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 XPO6Q96QU8 1125 aaKnown RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 ELOVL4Q9GZR5 314 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 HMX1Q9NP08 348 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 TCRBV7S2A1N4TA0A589 114 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 FSCN2O14926 492 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 PTPN1P18031 435 aaKnown RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 RAB27AP51159 221 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 TMPRSS15P98073 1019 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 TMEM63BQ5T3F8 832 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 RASGEF1CQ8N431 466 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 LRRC52Q8N7C0 313 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 TFB1MQ8WVM0 346 aaKnown RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 ZNF512Q96ME7 567 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 PCYOX1Q9UHG3 505 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 IPPQ9Y573 584 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 TCP11X1B4DZS4 312 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 C2CD2LO14523 706 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 CYP2F1P24903 491 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 ERMARDQ5T6L9 678 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 LRRC38Q5VT99 294 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 MON1BQ7L1V2 547 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 LMO3Q8TAP4 145 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 SLITRK1Q96PX8 696 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 FRMD8P1Q9BZ68 369 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 SP110Q9HB58 689 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 PCDH9Q9HC56 1237 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 SENP1Q9P0U3 644 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 ZFATQ9P243 1243 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 A0A1B0GUA9 196 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 BNIP3LO60238 219 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 DUSP11O75319 330 aaKnown RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 CILPO75339 1184 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 SNAI1O95863 264 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 YWHAHQ04917 246 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 MORF4L2Q15014 288 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 PRUNE1Q86TP1 453 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 PIGZQ86VD9 579 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 CPNE8Q86YQ8 564 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 CCDC97Q96F63 343 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 ATXN7L3BQ96GX2 97 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 TBCBQ99426 244 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 DDX23Q9BUQ8 820 aaKnown RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 FAM105AQ9NUU6 356 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 PSMC3IPQ9P2W1 217 aaPredicted RBP14.6□□□□□ -0.07
SCAF4-202ENST00000399804 TJP2Q9UDY2 1190 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 RAD23BP54727 409 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 ZNF844Q08AG5 666 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 ACAP1Q15027 740 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 ZDHHC17Q8IUH5 632 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 UBR3Q6ZT12 1888 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 MYH4Q9Y623 1939 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 SMAPO00193 183 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 O00370 1275 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 F9P00740 461 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 ZNF143P52747 638 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-202ENST00000399804 C9orf57Q5W0N0 161 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-202ENST00000399804 SMC1BQ8NDV3 1235 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 GIMAP7Q8NHV1 300 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 KLHL29Q96CT2 875 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 SERPINB12Q96P63 405 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 LRRC19Q9H756 370 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 PGAP2Q9UHJ9 254 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 MYH8P13535 1937 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 MYH11P35749 1972 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 A0A0G2JND7 137 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 FBXO21O94952 628 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 PECAM1P16284 738 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-202ENST00000399804 AMPD1P23109 780 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 ENPEPQ07075 957 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 CRHR2Q13324 411 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 BFSP2Q13515 415 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 DUPD1Q68J44 220 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 NXNQ6DKJ4 435 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 MIB1Q86YT6 1006 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 ANKRD52Q8NB46 1076 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 B3GALNT2Q8NCR0 500 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 CCT6BQ92526 530 aa14.59□□□□□ -0.07
SCAF4-202ENST00000399804 PABPC5Q96DU9 382 aaKnown RBP14.59□□□□□ -0.07
SCAF4-202ENST00000399804 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-202ENST00000399804 UNCXA6NJT0 531 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 TULP2O00295 520 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 UNGP13051 313 aaPredicted RBP14.58□□□□□ -0.07
SCAF4-202ENST00000399804 ETS1P14921 441 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 BDNFP23560 247 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 ALDH7A1P49419 539 aaKnown RBP14.58□□□□□ -0.07
SCAF4-202ENST00000399804 AARSP49588 968 aaKnown RBP eCLIP14.58□□□□□ -0.07
SCAF4-202ENST00000399804 EPHB1P54762 984 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 CTXN3Q4LDR2 81 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 CRELD2Q6UXH1 353 aaPredicted RBP14.58□□□□□ -0.07
SCAF4-202ENST00000399804 ILDR2Q71H61 639 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 AFAP1L2Q8N4X5 818 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 ATPAF2Q8N5M1 289 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 EIF1ADQ8N9N8 165 aaKnown RBP14.58□□□□□ -0.07
SCAF4-202ENST00000399804 FBXO36Q8NEA4 188 aa14.58□□□□□ -0.07
SCAF4-202ENST00000399804 COLEC11Q9BWP8 271 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms