RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 VTA1Q9NP79 307 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 ARHGEF3Q9NR81 526 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-202ENST00000394888 CHKBQ9Y259 395 aa16.09■□□□□ 0.17
CPSF7-202ENST00000394888 HMX2A2RU54 273 aa16.08■□□□□ 0.17
CPSF7-202ENST00000394888 CTC1Q2NKJ3 1217 aa16.08■□□□□ 0.17
CPSF7-202ENST00000394888 FAM133BQ5BKY9 247 aaKnown RBP16.08■□□□□ 0.17
CPSF7-202ENST00000394888 FAM102AQ5T9C2 384 aaPredicted RBP16.08■□□□□ 0.17
CPSF7-202ENST00000394888 FBF1Q8TES7 1133 aa16.08■□□□□ 0.17
CPSF7-202ENST00000394888 RNF157Q96PX1 679 aa16.08■□□□□ 0.17
CPSF7-202ENST00000394888 KCNK9Q9NPC2 374 aa16.08■□□□□ 0.17
CPSF7-202ENST00000394888 SLC5A4Q9NY91 659 aa16.08■□□□□ 0.17
CPSF7-202ENST00000394888 CNTN3Q9P232 1028 aa16.08■□□□□ 0.17
CPSF7-202ENST00000394888 TTLL3Q9Y4R7 772 aa16.08■□□□□ 0.17
CPSF7-202ENST00000394888 ASB14A6NK59 587 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 FAM155BO75949 473 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 ATP5DP30049 168 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 GRIK4Q16099 956 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 FASTKD5Q7L8L6 764 aaKnown RBP16.08■□□□□ 0.16
CPSF7-202ENST00000394888 SERAC1Q96JX3 654 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 CNPY3Q9BT09 278 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 PCDH18Q9HCL0 1135 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 GPATCH2LQ9NWQ4 482 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 MORF4L1Q9UBU8 362 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 MFHAS1Q9Y4C4 1052 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 HES2Q9Y543 173 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 BTBD19C9JJ37 291 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 EDF1O60869 148 aaKnown RBP16.08■□□□□ 0.16
CPSF7-202ENST00000394888 ATP2C2O75185 946 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 GPD1P21695 349 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 GRB14Q14449 540 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 NPLOC4Q8TAT6 608 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 PTPN18Q99952 460 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 TRIM56Q9BRZ2 755 aaKnown RBP16.08■□□□□ 0.16
CPSF7-202ENST00000394888 SLC17A7Q9P2U7 560 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 STARD13Q9Y3M8 1113 aa16.08■□□□□ 0.16
CPSF7-202ENST00000394888 GOLGA6L7A0A1B0GV03 622 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 POC1B-GALNT4F8VUJ3 575 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 H3BRB1 525 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 NEK3P51956 506 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 GEMIN4P57678 1058 aaKnown RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 EIF3EP60228 445 aaKnown RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 PDE4CQ08493 712 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 WLSQ5T9L3 541 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 TAB3Q8N5C8 712 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 BRI3BPQ8WY22 251 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 TUT1Q9H6E5 874 aaKnown RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 RXFP1Q9HBX9 757 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 A8MUI8 341 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 IFNB1P01574 187 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 TNFAIP2Q03169 654 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 CCDC15Q0P6D6 951 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 DNAJC3Q13217 504 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 GOLGA7BQ2TAP0 167 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 HSF5Q4G112 596 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 XKR4Q5GH76 650 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 USP50Q70EL3 339 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 CENPUQ71F23 418 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 PARP9Q8IXQ6 854 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 SPATA18Q8TC71 538 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 PAFAH2Q99487 392 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 FAM124BQ9H5Z6 455 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 HESX1Q9UBX0 185 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 AMHP03971 560 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 OSBPP22059 807 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 YWHAZP63104 245 aaKnown RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 SYCP2LQ5T4T6 812 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 MAML3Q96JK9 1138 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 HEXIM2Q96MH2 286 aaKnown RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 POPDC2Q9HBU9 364 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 PSMC3IPQ9P2W1 217 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 XPO7Q9UIA9 1087 aaKnown RBP16.07■□□□□ 0.16
CPSF7-202ENST00000394888 ARL2BPQ9Y2Y0 163 aa16.07■□□□□ 0.16
CPSF7-202ENST00000394888 TCRBV9S1A1TA0A576 114 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 CXorf49A8MYA2 514 aaPredicted RBP16.06■□□□□ 0.16
CPSF7-202ENST00000394888 KRT16P08779 473 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 RBP3P10745 1247 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 RGS7P49802 495 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 SOX4Q06945 474 aaPredicted RBP16.06■□□□□ 0.16
CPSF7-202ENST00000394888 UBXN11Q5T124 520 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 KCTD6Q8NC69 237 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
CPSF7-202ENST00000394888 ADPGKQ9BRR6 497 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 SNTG2Q9NY99 539 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 SAMD15Q9P1V8 674 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 AKT3Q9Y243 479 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 MBLAC1A4D2B0 266 aaPredicted RBP16.06■□□□□ 0.16
CPSF7-202ENST00000394888 ATP6V1G2O95670 118 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 SCUBE3Q8IX30 993 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 SNRNP25Q9BV90 132 aaKnown RBP16.06■□□□□ 0.16
CPSF7-202ENST00000394888 KCNK13Q9HB14 408 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 PNPLA8Q9NP80 782 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 CEP83Q9Y592 693 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 L1CAMP32004 1257 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 ELK3P41970 407 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 MKRN3Q13064 507 aaKnown RBP16.06■□□□□ 0.16
CPSF7-202ENST00000394888 ARHGEF18Q6ZSZ5 1173 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 CDHR3Q6ZTQ4 885 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 ACOT1Q86TX2 421 aa16.06■□□□□ 0.16
CPSF7-202ENST00000394888 MAGEC3Q8TD91 643 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms