RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 BAZ2AQ9UIF9 1905 aaKnown RBP13.62□□□□□ -0.23
PTPRN2-202ENST00000389416 GPR25O00155 361 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 CCR1P32246 355 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 BRCC3P46736 316 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 OCRLQ01968 901 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 MFSD7Q6UXD7 560 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 TFAP2DQ7Z6R9 452 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 TBC1D1Q86TI0 1168 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 NUDCD3Q8IVD9 361 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 SPEF2Q9C093 1822 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 DNAJC6O75061 913 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 ZNF189O75820 626 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 TOMM70O94826 608 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 MIPP30301 263 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 SLC6A3Q01959 620 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 UNC93AQ86WB7 457 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 SPATS2Q86XZ4 545 aaKnown RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 C12orf56Q8IXR9 622 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 C3orf20Q8ND61 904 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 FBXO25Q8TCJ0 367 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 CHMP6Q96FZ7 201 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 TACO1Q9BSH4 297 aaKnown RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 C10orf71Q711Q0 1435 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 E2F8A0AVK6 867 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 CHEK2O96017 543 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 PIGZQ86VD9 579 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 AGR3Q8TD06 166 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 ACTRT1Q8TDG2 376 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 KRT35Q92764 455 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 TRIM55Q9BYV6 548 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 CEP41Q9BYV8 373 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 C20orf96Q9NUD7 363 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 COL1A2P08123 1366 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 CCDC160A6NGH7 325 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 PSMD3O43242 534 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 CST3P01034 146 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 CYP2F1P24903 491 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 RFC1P35251 1148 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 C15orf59Q2T9L4 293 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 NAPEPLDQ6IQ20 393 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 LNX1Q8TBB1 728 aaPredicted RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 CASKIN2Q8WXE0 1202 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 KLHL29Q96CT2 875 aa13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 PPARGC1AQ9UBK2 798 aaKnown RBP13.61□□□□□ -0.23
PTPRN2-202ENST00000389416 ASMTLO95671 621 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 LTFP02788 710 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 INHAP05111 366 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 HABP4Q5JVS0 413 aaKnown RBP13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 ERMARDQ5T6L9 678 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 NT5DC3Q86UY8 548 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 CARNMT1Q8N4J0 409 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 B3GALNT2Q8NCR0 500 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 FTHL17Q9BXU8 183 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 AVENQ9NQS1 362 aaPredicted RBP13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 SMIM28A0A1B0GU29 152 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 BAG2O95816 211 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 BEND6Q5SZJ8 279 aaPredicted RBP13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 CINPQ9BW66 212 aaPredicted RBP13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 GPR63Q9BZJ6 419 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 TUBGCP4Q9UGJ1 667 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 PCDHA2Q9Y5H9 948 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 POLBP06746 335 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 AMPD1P23109 780 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 PCK1P35558 622 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 FMO1Q01740 532 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 RABGAP1LQ5R372 815 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 MAF1Q9H063 256 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 UBP1Q9NZI7 540 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 DUOX1Q9NRD9 1551 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 AP3B1O00203 1094 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 DHX15O43143 795 aaKnown RBP13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 TBX4P57082 545 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 ULK4Q96C45 1275 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 ATXN3LQ9H3M9 355 aa13.6□□□□□ -0.23
PTPRN2-202ENST00000389416 NUP98P52948 1817 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 TXNDC9O14530 226 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 SCAMP3O14828 347 aaKnown RBP13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 NDUFS3O75489 264 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 GUCY1A3Q02108 690 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 USP10Q14694 798 aaKnown RBP13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 RUBCNQ92622 972 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 FOXP3Q9BZS1 431 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 VPS28Q9UK41 221 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 AKT1P31749 480 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 TUFMP49411 452 aaKnown RBP13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 FSTL1Q12841 308 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 IRF2BP2Q7Z5L9 587 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 TMEM199Q8N511 208 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 BLOC1S5Q8TDH9 187 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 KREMEN1Q96MU8 473 aa13.59□□□□□ -0.23
PTPRN2-202ENST00000389416 ZNF558Q96NG5 402 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms