RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CEP290O15078 2479 aa15.43■□□□□ 0.06
CXCL12-201ENST00000343575 OR6C75A6NL08 312 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 MYO1FO00160 1098 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 ZNF185O15231 689 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 DDX3YO15523 660 aaKnown RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 PROSCO94903 275 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 SOD2P04179 222 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 LCP1P13796 627 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 CXCR5P32302 372 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 SLC6A3Q01959 620 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 CFAP221Q4G0U5 840 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 FAM109BQ6ICB4 259 aaPredicted RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 ANKS3Q6ZW76 656 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 SYCE1Q8N0S2 351 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 TTC9BQ8N6N2 239 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 ARFGAP1Q8N6T3 406 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 PIK3R5Q8WYR1 880 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 RAD9AQ99638 391 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 MIS12Q9H081 205 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 CRISPLD1Q9H336 500 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 SPG21Q9NZD8 308 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 MTRRQ9UBK8 725 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 F8VP50 259 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 GRAP2O75791 330 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 CAPN15O75808 1086 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 ARHGEF15O94989 841 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 SYF2O95926 243 aaKnown RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 PRLRP16471 622 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 RPL17P18621 184 aaKnown RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 FLT3P36888 993 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 MARCKSL1P49006 195 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 DSG1Q02413 1049 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 ADIGQ0VDE8 80 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 FAM102AQ5T9C2 384 aaPredicted RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 SLC8B1Q6J4K2 584 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 TADA2BQ86TJ2 420 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 DDX53Q86TM3 631 aaKnown RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 DCP1BQ8IZD4 617 aaKnown RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 FIBCD1Q8N539 461 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 ATAD1Q8NBU5 361 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 NOA1Q8NC60 698 aaKnown RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 RIN2Q8WYP3 895 aaPredicted RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 ALG3Q92685 438 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 KRT35Q92764 455 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 TMEM169Q96HH4 297 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 PGLYRP2Q96PD5 576 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 OSBPL9Q96SU4 736 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 LBHD1Q9BQE6 289 aaPredicted RBP15.42■□□□□ 0.06
CXCL12-201ENST00000343575 ZBED2Q9BTP6 218 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 SELENOOQ9BVL4 669 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 AMFRQ9UKV5 643 aa15.42■□□□□ 0.06
CXCL12-201ENST00000343575 TCF4P15884 667 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 MAGEA10P43363 369 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-201ENST00000343575 ACADSBP45954 432 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 PEX5P50542 639 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 ITIH3Q06033 890 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 GPR17Q13304 367 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 SWT1Q5T5J6 900 aaKnown RBP15.41■□□□□ 0.06
CXCL12-201ENST00000343575 DCAF12L1Q5VU92 463 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 RNF19BQ6ZMZ0 732 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 BHLHA9Q7RTU4 235 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 SPATA2LQ8IUW3 424 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-201ENST00000343575 FAM76AQ8TAV0 307 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 CLSTN3Q9BQT9 956 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 ADAM33Q9BZ11 813 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 BACE2Q9Y5Z0 518 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 CDY1Q9Y6F8 540 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
CXCL12-201ENST00000343575 ATXN2Q99700 1313 aaKnown RBP15.4■□□□□ 0.06
CXCL12-201ENST00000343575 MTMR11A4FU01 709 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 C2CD4BA6NLJ0 364 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 GRXCR1A8MXD5 290 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 H7C4K7 107 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 TNFRSF10BO14763 440 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 DNA2P51530 1060 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 TKTL1P51854 596 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 TAS2R40P59535 323 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 TAP1Q03518 808 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 RPS6KA1Q15418 735 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 PSMD5Q16401 504 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 RAB6CQ53S08 254 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 SLC26A9Q7LBE3 791 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 PACS2Q86VP3 889 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 SPATS2Q86XZ4 545 aaKnown RBP15.4■□□□□ 0.06
CXCL12-201ENST00000343575 CREG2Q8IUH2 290 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 ZDHHC17Q8IUH5 632 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 NIPA2Q8N8Q9 360 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 FBXO22Q8NEZ5 403 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 FNIP1Q8TF40 1166 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 FUBP3Q96I24 572 aaKnown RBP eCLIP15.4■□□□□ 0.06
CXCL12-201ENST00000343575 HERC2P3Q9BVR0 1158 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 RAB6CQ9H0N0 254 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 DMAP1Q9NPF5 467 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-201ENST00000343575 ABI2Q9NYB9 513 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-201ENST00000343575 PATJQ8NI35 1801 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 WDR27A2RRH5 827 aa15.4■□□□□ 0.06
CXCL12-201ENST00000343575 PDE2AO00408 941 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms