RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 PHKG1Q16816 387 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 HMBOX1Q6NT76 420 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PSMA8Q8TAA3 256 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 BDH2Q9BUT1 245 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF846Q147U1 533 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 CHURC1Q8WUH1 139 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 BPIFA3Q9BQP9 254 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF408Q9H9D4 720 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 NXF1Q9UBU9 619 aaKnown RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PHB2Q99623 299 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 AIF1LQ9BQI0 150 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF112Q9UJU3 913 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 SLC12A4Q9UP95 1085 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PHF3Q92576 2039 aaKnown RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 CHI3L2Q15782 390 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 LRRC74BQ6ZQY2 392 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 OR7A2PQ8NGA2 310 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 UTP15Q8TED0 518 aaKnown RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 GDPD5Q8WTR4 605 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 KLHL11Q9NVR0 708 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 TRPM5Q9NZQ8 1165 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ATXN10Q9UBB4 475 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 MBD5Q9P267 1494 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ATG2BQ96BY7 2078 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 POU1F1P28069 291 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ILF3Q12906 894 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ABRQ12979 859 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 KIZQ2M2Z5 673 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 NIM1KQ8IY84 436 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 C3orf20Q8ND61 904 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 TRIM2Q9C040 744 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 DYRK4Q9NR20 520 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 LATS2Q9NRM7 1088 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 DNAJC11Q9NVH1 559 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 CENPIQ92674 756 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 BFARQ9NZS9 450 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 GGA2Q9UJY4 613 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ARHGEF40Q8TER5 1519 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 TCP10L2B9ZVM9 353 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 CDH16O75309 829 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ULK1O75385 1050 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 ZNF682O95780 498 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 UGP2Q16851 508 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PDCD4Q53EL6 469 aaKnown RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 SETD9Q8NE22 299 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 METTL8Q9H825 291 aaKnown RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 LIN7AO14910 233 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 SEC24AO95486 1093 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 DCAF4L1Q3SXM0 396 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 COPRSQ9NQ92 184 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 PLEKHG2Q9H7P9 1386 aa11.53□□□□□ -0.56
HDGFL3-201ENST00000299633 SNAP23O00161 211 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 KPNA3O00505 521 aaPredicted RBP11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 PGK1P00558 417 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 OR6B2Q6IFH4 312 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 GATAD2BQ8WXI9 593 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 RPF1Q9H9Y2 349 aaKnown RBP11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 TRMT13Q9NUP7 481 aaKnown RBP11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 NMRK1Q9NWW6 199 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 TPRKBQ9Y3C4 175 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 TCEA3O75764 348 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 ROR2Q01974 943 aaKnown RBP11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 FAM43BQ6ZT52 329 aaPredicted RBP11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 EFL1Q7Z2Z2 1120 aaKnown RBP11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 TTLL1O95922 423 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 GALNT3Q14435 633 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 FAM9CQ8IZT9 166 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 TASP1Q9H6P5 420 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 CYP39A1Q9NYL5 469 aa11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 RBMX2Q9Y388 322 aaKnown RBP11.52□□□□□ -0.56
HDGFL3-201ENST00000299633 UBN2Q6ZU65 1347 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 LGALS16A8MUM7 142 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 PCP11498 1178 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 KCNB1Q14721 858 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 BHMTQ93088 406 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 KMT5AQ9NQR1 393 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 EPN2O95208 641 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 CLTBP09497 229 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 DYNLL1P63167 89 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 PTK7Q13308 1070 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 BYSLQ13895 437 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 SLC15A2Q16348 729 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 GPD1LQ8N335 351 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 LRRN4CLQ8ND94 238 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 ZNF577Q9BSK1 485 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 IRAK3Q9Y616 596 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 ADAM17P78536 824 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 ABCB5Q2M3G0 1257 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 TTC23Q5W5X9 447 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 STK32CQ86UX6 486 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 MMADHCQ9H3L0 296 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 IL12AP29459 219 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 ADCK2Q7Z695 626 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 LSM14AQ8ND56 463 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 DPF3Q92784 378 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 PCIF1Q9H4Z3 704 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 TBC1D24Q9ULP9 559 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms