RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C YCL021W-AQ96VH3 125 aa4.75□□□□□ -1.65
UME1YPL139C YER039C-AP0CD97 72 aa4.74□□□□□ -1.65
UME1YPL139C PEX17P40155 199 aa4.74□□□□□ -1.65
UME1YPL139C YLR112WQ12130 139 aa4.74□□□□□ -1.65
UME1YPL139C YBL112CQ3E7Y4 105 aa4.74□□□□□ -1.65
UME1YPL139C YCR007CP25354 239 aa4.73□□□□□ -1.65
UME1YPL139C YER134CP40081 178 aa4.73□□□□□ -1.65
UME1YPL139C YPL073CP40323 161 aa4.73□□□□□ -1.65
UME1YPL139C SNA2P56508 79 aa4.73□□□□□ -1.65
UME1YPL139C YGR039WP53225 103 aa4.72□□□□□ -1.65
UME1YPL139C ENV10Q99382 181 aa4.72□□□□□ -1.65
UME1YPL139C YAL065CO13511 128 aa4.71□□□□□ -1.66
UME1YPL139C ATP15P21306 62 aa4.71□□□□□ -1.66
UME1YPL139C GTT1P40582 234 aa4.71□□□□□ -1.66
UME1YPL139C YFL067WP43537 175 aa4.71□□□□□ -1.66
UME1YPL139C YGL034CP53186 121 aa4.71□□□□□ -1.66
UME1YPL139C AIM11P87275 137 aa4.71□□□□□ -1.66
UME1YPL139C YDR042CQ03205 200 aa4.71□□□□□ -1.66
UME1YPL139C ADH1P00330 348 aaKnown RBP4.69□□□□□ -1.66
UME1YPL139C YDL022C-AP0C5L6 82 aa4.69□□□□□ -1.66
UME1YPL139C YGL118CP53132 145 aa4.68□□□□□ -1.66
UME1YPL139C YMR175W-AQ3E766 64 aa4.68□□□□□ -1.66
UME1YPL139C YNL277W-AQ3E7Z0 62 aa4.68□□□□□ -1.66
UME1YPL139C YHR139C-AO13536 103 aa4.67□□□□□ -1.66
UME1YPL139C MBF1O14467 151 aaKnown RBP4.67□□□□□ -1.66
UME1YPL139C POP3P53833 195 aaPredicted RBP4.67□□□□□ -1.66
UME1YPL139C DDR48P18899 430 aaKnown RBP4.66□□□□□ -1.66
UME1YPL139C YAR029WP39549 74 aa4.66□□□□□ -1.66
UME1YPL139C SFT1P43682 97 aa4.66□□□□□ -1.66
UME1YPL139C LCL1Q02786 101 aa4.66□□□□□ -1.66
UME1YPL139C TSC3Q3E790 80 aa4.66□□□□□ -1.66
UME1YPL139C FYV4P38783 130 aaPredicted RBP4.65□□□□□ -1.66
UME1YPL139C VTC1P40046 129 aaRIP-Chip data4.65□□□□□ -1.66not detected
UME1YPL139C YGL230CP53074 147 aa4.65□□□□□ -1.66
UME1YPL139C ERV14P53173 138 aa4.65□□□□□ -1.66
UME1YPL139C YMR103CQ04436 120 aa4.65□□□□□ -1.66
UME1YPL139C COX14P39103 70 aa4.64□□□□□ -1.67
UME1YPL139C IGD1P43598 195 aa4.62□□□□□ -1.67
UME1YPL139C KTI11Q3E840 82 aa4.62□□□□□ -1.67
UME1YPL139C SHU1P38751 150 aa4.61□□□□□ -1.67
UME1YPL139C YEL067CP39978 195 aa4.61□□□□□ -1.67
UME1YPL139C CWP2P43497 92 aa4.61□□□□□ -1.67
UME1YPL139C YLR412C-AQ3E742 68 aa4.61□□□□□ -1.67
UME1YPL139C ECM12O13529 151 aa4.6□□□□□ -1.67
UME1YPL139C AQY2P0CD90 149 aa4.6□□□□□ -1.67
UME1YPL139C PAU16P35994 123 aa4.6□□□□□ -1.67
UME1YPL139C AIM19P40502 157 aa4.6□□□□□ -1.67
UME1YPL139C SBH1P52870 82 aa4.6□□□□□ -1.67
UME1YPL139C SEN15Q04675 128 aa4.6□□□□□ -1.67
UME1YPL139C YDL241WQ07738 123 aa4.6□□□□□ -1.67
UME1YPL139C CPR1P14832 162 aaKnown RBP4.59□□□□□ -1.67
UME1YPL139C YER181CP40097 107 aa4.59□□□□□ -1.67
UME1YPL139C MRPS12P53732 153 aa4.59□□□□□ -1.67
UME1YPL139C ELC1Q03071 99 aa4.59□□□□□ -1.67
UME1YPL139C SCS22Q6Q595 175 aa4.59□□□□□ -1.67
UME1YPL139C HTL1Q9URQ5 78 aa4.58□□□□□ -1.68
UME1YPL139C HYP2P23301 157 aaKnown RBP4.57□□□□□ -1.68
UME1YPL139C EDC2P40023 145 aaPredicted RBP4.57□□□□□ -1.68
UME1YPL139C YBL008W-AQ3E821 79 aa4.57□□□□□ -1.68
UME1YPL139C TDA8Q6B2U8 126 aa4.57□□□□□ -1.68
UME1YPL139C ATP5P09457 212 aa4.56□□□□□ -1.68
UME1YPL139C YNL190WP53872 204 aa4.56□□□□□ -1.68
UME1YPL139C YPL261CQ08976 102 aa4.56□□□□□ -1.68
UME1YPL139C MVB12P42939 101 aa4.55□□□□□ -1.68
UME1YPL139C YFR032C-BQ8TGU2 87 aa4.55□□□□□ -1.68
UME1YPL139C SCM4P32564 187 aa4.54□□□□□ -1.68
UME1YPL139C YGL193CP53097 103 aa4.54□□□□□ -1.68
UME1YPL139C SMD1Q02260 146 aaPredicted RBP4.54□□□□□ -1.68
UME1YPL139C YDR010CQ12426 110 aa4.54□□□□□ -1.68
UME1YPL139C YIL134C-AQ45U18 67 aa4.54□□□□□ -1.68
UME1YPL139C YHR130CP38834 111 aa4.53□□□□□ -1.68
UME1YPL139C SKI6P46948 246 aaPredicted RBP4.53□□□□□ -1.68
UME1YPL139C YGL041C-BQ3E750 60 aa4.53□□□□□ -1.68
UME1YPL139C YLL006W-AQ3E814 58 aa4.53□□□□□ -1.68
UME1YPL139C ISD11Q6Q560 94 aa4.53□□□□□ -1.68
UME1YPL139C Q0032Q9ZZX7 96 aa4.53□□□□□ -1.68
UME1YPL139C YFL019CP43576 117 aa4.53□□□□□ -1.69
UME1YPL139C YNR077CP53758 84 aa4.53□□□□□ -1.69
UME1YPL139C CUE4Q04201 117 aaPredicted RBP4.53□□□□□ -1.69
UME1YPL139C YBL039W-BP0C268 59 aa4.52□□□□□ -1.69
UME1YPL139C SEC11P15367 167 aa4.52□□□□□ -1.69
UME1YPL139C COX10P21592 462 aa4.52□□□□□ -1.69
UME1YPL139C ARO2P28777 376 aaKnown RBP4.52□□□□□ -1.69
UME1YPL139C SSS1P35179 80 aa4.52□□□□□ -1.69
UME1YPL139C PPT2Q12036 173 aa4.52□□□□□ -1.69
UME1YPL139C MRPL44P19956 98 aa4.5□□□□□ -1.69
UME1YPL139C MRPL11P36521 249 aaPredicted RBP4.49□□□□□ -1.69
UME1YPL139C YOL014WQ08110 124 aa4.49□□□□□ -1.69
UME1YPL139C YNL162W-AQ3E7A8 72 aa4.49□□□□□ -1.69
UME1YPL139C QCR8P08525 94 aa4.48□□□□□ -1.69
UME1YPL139C YJL197C-AP0C5P0 93 aa4.48□□□□□ -1.69
UME1YPL139C HAP3P13434 144 aa4.48□□□□□ -1.69
UME1YPL139C CDC43P18898 376 aa4.48□□□□□ -1.69
UME1YPL139C YGR164WP53291 111 aa4.48□□□□□ -1.69
UME1YPL139C HHF1P02309 103 aaKnown RBP4.47□□□□□ -1.69
UME1YPL139C YPR170W-BP0C5R9 85 aa4.47□□□□□ -1.69
UME1YPL139C YLR156WP0CE96 114 aa4.47□□□□□ -1.69
UME1YPL139C YLR159WP0CE97 114 aa4.47□□□□□ -1.69
UME1YPL139C YLR161WP0CE98 114 aa4.47□□□□□ -1.69
UME1YPL139C MID2P36027 376 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms