RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W RDS3Q06835 107 aaPredicted RBP2.6□□□□□ -1.99
MSD1YPL104W PAI3P01094 68 aa2.59□□□□□ -2
MSD1YPL104W YFR057WP43625 151 aa2.59□□□□□ -2
MSD1YPL104W HAL1Q01766 294 aa2.59□□□□□ -2
MSD1YPL104W YMR295CQ03559 197 aa2.59□□□□□ -2
MSD1YPL104W YLR296WQ05898 108 aa2.59□□□□□ -2
MSD1YPL104W PPT2Q12036 173 aa2.59□□□□□ -2
MSD1YPL104W YIL102C-AQ2V2P5 75 aa2.59□□□□□ -2
MSD1YPL104W YNL162W-AQ3E7A8 72 aa2.59□□□□□ -2
MSD1YPL104W QCR8P08525 94 aa2.58□□□□□ -2
MSD1YPL104W YBR219CP38317 127 aa2.58□□□□□ -2
MSD1YPL104W PEX22P39718 180 aa2.58□□□□□ -2
MSD1YPL104W YER181CP40097 107 aa2.58□□□□□ -2
MSD1YPL104W MRPS12P53732 153 aa2.58□□□□□ -2
MSD1YPL104W ENV10Q99382 181 aa2.58□□□□□ -2
MSD1YPL104W YPR010C-AA5Z2X5 72 aa2.58□□□□□ -2
MSD1YPL104W AUA1P32450 94 aa2.58□□□□□ -2
MSD1YPL104W UGX2P32772 223 aa2.58□□□□□ -2
MSD1YPL104W SPT4P32914 102 aaPredicted RBP2.58□□□□□ -2
MSD1YPL104W YNL198CP40166 100 aa2.58□□□□□ -2
MSD1YPL104W ADH1P00330 348 aaKnown RBP2.57□□□□□ -2
MSD1YPL104W ERG28P40030 148 aa2.57□□□□□ -2
MSD1YPL104W SPC1P46965 94 aa2.57□□□□□ -2
MSD1YPL104W YNL190WP53872 204 aa2.57□□□□□ -2
MSD1YPL104W RPL33AP05744 107 aaKnown RBP2.56□□□□□ -2
MSD1YPL104W YRA2P36036 203 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
MSD1YPL104W POP7P38291 140 aa2.56□□□□□ -2
MSD1YPL104W RPL33BP41056 107 aaKnown RBP2.56□□□□□ -2
MSD1YPL104W YJR085CP47131 105 aaKnown RBP2.56□□□□□ -2
MSD1YPL104W ANB1P19211 157 aa2.56□□□□□ -2
MSD1YPL104W MID2P36027 376 aa2.56□□□□□ -2
MSD1YPL104W YMR320WQ04897 101 aa2.56□□□□□ -2
MSD1YPL104W LSM6Q06406 86 aaKnown RBP2.56□□□□□ -2
MSD1YPL104W YMR175W-AQ3E766 64 aa2.56□□□□□ -2
MSD1YPL104W YAL065CO13511 128 aa2.54□□□□□ -2
MSD1YPL104W HYP2P23301 157 aaKnown RBP2.54□□□□□ -2
MSD1YPL104W RPC10P40422 70 aa2.54□□□□□ -2
MSD1YPL104W CWP2P43497 92 aa2.54□□□□□ -2
MSD1YPL104W PBA1Q05778 276 aa2.54□□□□□ -2
MSD1YPL104W YKL183C-AQ3E765 70 aa2.54□□□□□ -2
MSD1YPL104W YBR121C-AP0C5L4 52 aa2.54□□□□□ -2
MSD1YPL104W NHP2P32495 156 aaPredicted RBP2.54□□□□□ -2
MSD1YPL104W RTC6O14464 93 aa2.53□□□□□ -2
MSD1YPL104W YHR130CP38834 111 aa2.53□□□□□ -2
MSD1YPL104W SVP26P38869 228 aa2.53□□□□□ -2
MSD1YPL104W YAL064WP39711 94 aa2.53□□□□□ -2
MSD1YPL104W YDR115WQ04598 105 aa2.53□□□□□ -2
MSD1YPL104W YDL241WQ07738 123 aa2.53□□□□□ -2
MSD1YPL104W YLL006W-AQ3E814 58 aa2.53□□□□□ -2
MSD1YPL104W YLL066W-BQ8TGJ7 56 aa2.53□□□□□ -2
MSD1YPL104W YOR020W-AQ3E824 90 aa2.52□□□□□ -2.01
MSD1YPL104W ARO2P28777 376 aaKnown RBP2.52□□□□□ -2.01
MSD1YPL104W YBL081WP38180 368 aaKnown RBP2.52□□□□□ -2.01
MSD1YPL104W RGM1Q00453 211 aa2.52□□□□□ -2.01
MSD1YPL104W YER078W-AQ3E7A2 54 aa2.52□□□□□ -2.01
MSD1YPL104W HHF1P02309 103 aaKnown RBP2.51□□□□□ -2.01
MSD1YPL104W ABF2Q02486 183 aa2.5□□□□□ -2.01
MSD1YPL104W RRT15Q3E811 62 aa2.5□□□□□ -2.01
MSD1YPL104W YAR023CD6VPM8 179 aa2.5□□□□□ -2.01
MSD1YPL104W AQY2P0CD90 149 aa2.5□□□□□ -2.01
MSD1YPL104W COX10P21592 462 aa2.5□□□□□ -2.01
MSD1YPL104W MVB12P42939 101 aa2.5□□□□□ -2.01
MSD1YPL104W HUR1P45820 110 aa2.5□□□□□ -2.01
MSD1YPL104W HPA2Q06592 156 aa2.5□□□□□ -2.01
MSD1YPL104W RPL29P05747 59 aaPredicted RBP2.49□□□□□ -2.01
MSD1YPL104W YFL019CP43576 117 aa2.49□□□□□ -2.01
MSD1YPL104W SMD1Q02260 146 aaPredicted RBP2.49□□□□□ -2.01
MSD1YPL104W YPL229WQ99395 206 aa2.49□□□□□ -2.01
MSD1YPL104W YBL039W-BP0C268 59 aa2.49□□□□□ -2.01
MSD1YPL104W MRPL24P36525 258 aaPredicted RBP2.49□□□□□ -2.01
MSD1YPL104W KNH1P50112 268 aa2.49□□□□□ -2.01
MSD1YPL104W SNA2P56508 79 aa2.48□□□□□ -2.01
MSD1YPL104W IRC21Q04772 201 aa2.48□□□□□ -2.01
MSD1YPL104W YOR034C-AQ3E735 80 aa2.48□□□□□ -2.01
MSD1YPL104W YLR236CA0A023PZG4 107 aa2.47□□□□□ -2.01
MSD1YPL104W RPA12P32529 125 aaKnown RBP2.47□□□□□ -2.01
MSD1YPL104W DSE2P38844 325 aa2.47□□□□□ -2.01
MSD1YPL104W AIM19P40502 157 aa2.47□□□□□ -2.01
MSD1YPL104W ICY1Q04329 127 aa2.47□□□□□ -2.01
MSD1YPL104W YPL257WQ08974 193 aa2.47□□□□□ -2.01
MSD1YPL104W RPL26AP05743 127 aaKnown RBP2.46□□□□□ -2.02
MSD1YPL104W UBC4P15731 148 aa2.46□□□□□ -2.02
MSD1YPL104W OST2P46964 130 aa2.46□□□□□ -2.02
MSD1YPL104W RPL26BP53221 127 aaKnown RBP2.46□□□□□ -2.02
MSD1YPL104W YDR029WQ12111 104 aa2.46□□□□□ -2.02
MSD1YPL104W SLO1Q3E784 85 aa2.46□□□□□ -2.02
MSD1YPL104W ATX1P38636 73 aa2.45□□□□□ -2.02
MSD1YPL104W IGD1P43598 195 aa2.45□□□□□ -2.02
MSD1YPL104W RUB1Q03919 77 aa2.45□□□□□ -2.02
MSD1YPL104W YGL041C-BQ3E750 60 aa2.45□□□□□ -2.02
MSD1YPL104W Q0032Q9ZZX7 96 aa2.45□□□□□ -2.02
MSD1YPL104W ECM12O13529 151 aa2.45□□□□□ -2.02
MSD1YPL104W MSA2P36157 363 aa2.45□□□□□ -2.02
MSD1YPL104W SMP1P38128 452 aa2.45□□□□□ -2.02
MSD1YPL104W MPC3P53311 146 aa2.45□□□□□ -2.02
MSD1YPL104W YPR195CQ06594 109 aa2.44□□□□□ -2.02
MSD1YPL104W YLR307C-AQ3E825 87 aa2.44□□□□□ -2.02
MSD1YPL104W YDR034C-AP0C289 58 aa2.43□□□□□ -2.02
MSD1YPL104W YJR107C-AP0CT86 78 aa2.43□□□□□ -2.02
MSD1YPL104W YCR085WP25650 117 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms