RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W COX14P39103 70 aa6.86□□□□□ -1.31
PRE6YOL038W YDL241WQ07738 123 aa6.86□□□□□ -1.31
PRE6YOL038W IGO2Q9P305 131 aa6.86□□□□□ -1.31
PRE6YOL038W YDL022C-AP0C5L6 82 aa6.84□□□□□ -1.31
PRE6YOL038W TOA2P32774 122 aa6.84□□□□□ -1.31
PRE6YOL038W SAE3P89114 91 aa6.84□□□□□ -1.31
PRE6YOL038W RPL28P02406 149 aaKnown RBP6.83□□□□□ -1.32
PRE6YOL038W CDC43P18898 376 aa6.83□□□□□ -1.32
PRE6YOL038W SMD1Q02260 146 aaPredicted RBP6.83□□□□□ -1.32
PRE6YOL038W ABF2Q02486 183 aa6.82□□□□□ -1.32
PRE6YOL038W SCM4P32564 187 aa6.81□□□□□ -1.32
PRE6YOL038W YDL085C-AQ3E7B7 68 aaKnown RBP6.81□□□□□ -1.32
PRE6YOL038W AQY2P0CD90 149 aa6.8□□□□□ -1.32
PRE6YOL038W OXA1P39952 402 aa6.8□□□□□ -1.32
PRE6YOL038W AIM19P40502 157 aa6.79□□□□□ -1.32
PRE6YOL038W MRPS12P53732 153 aa6.79□□□□□ -1.32
PRE6YOL038W UGX2P32772 223 aa6.78□□□□□ -1.32
PRE6YOL038W YEL067CP39978 195 aa6.77□□□□□ -1.33
PRE6YOL038W CWP2P43497 92 aa6.77□□□□□ -1.33
PRE6YOL038W YNR077CP53758 84 aa6.77□□□□□ -1.33
PRE6YOL038W YML079WQ03629 201 aa6.77□□□□□ -1.33
PRE6YOL038W PAU23Q07987 124 aa6.77□□□□□ -1.33
PRE6YOL038W PAU17Q12370 124 aa6.77□□□□□ -1.33
PRE6YOL038W YGL041C-BQ3E750 60 aa6.77□□□□□ -1.33
PRE6YOL038W ECM12O13529 151 aa6.76□□□□□ -1.33
PRE6YOL038W YFR057WP43625 151 aa6.76□□□□□ -1.33
PRE6YOL038W ELC1Q03071 99 aa6.76□□□□□ -1.33
PRE6YOL038W YDR010CQ12426 110 aa6.76□□□□□ -1.33
PRE6YOL038W MBF1O14467 151 aaKnown RBP6.75□□□□□ -1.33
PRE6YOL038W YJL197C-AP0C5P0 93 aa6.75□□□□□ -1.33
PRE6YOL038W MVB12P42939 101 aa6.75□□□□□ -1.33
PRE6YOL038W YNL190WP53872 204 aa6.75□□□□□ -1.33
PRE6YOL038W GLC8P41818 229 aa6.74□□□□□ -1.33
PRE6YOL038W EOS1P53938 366 aa6.74□□□□□ -1.33
PRE6YOL038W YLL006W-AQ3E814 58 aa6.74□□□□□ -1.33
PRE6YOL038W YBL039W-BP0C268 59 aa6.72□□□□□ -1.33
PRE6YOL038W MID2P36027 376 aa6.72□□□□□ -1.33
PRE6YOL038W YFL019CP43576 117 aa6.72□□□□□ -1.33
PRE6YOL038W YLR363W-AQ3E747 85 aa6.72□□□□□ -1.33
PRE6YOL038W Q0032Q9ZZX7 96 aa6.72□□□□□ -1.33
PRE6YOL038W IGD1P43598 195 aa6.71□□□□□ -1.34
PRE6YOL038W YBL112CQ3E7Y4 105 aa6.71□□□□□ -1.34
PRE6YOL038W UBC11P52492 156 aa6.7□□□□□ -1.34
PRE6YOL038W STF1P01098 86 aa6.69□□□□□ -1.34
PRE6YOL038W CWC27Q02770 301 aa6.69□□□□□ -1.34
PRE6YOL038W YIA6P40556 373 aa6.68□□□□□ -1.34
PRE6YOL038W HPA2Q06592 156 aa6.68□□□□□ -1.34
PRE6YOL038W YOR020W-AQ3E824 90 aa6.67□□□□□ -1.34
PRE6YOL038W YER181CP40097 107 aa6.66□□□□□ -1.34
PRE6YOL038W RPL29P05747 59 aaPredicted RBP6.65□□□□□ -1.34
PRE6YOL038W YHR130CP38834 111 aa6.65□□□□□ -1.34
PRE6YOL038W PAI3P01094 68 aa6.64□□□□□ -1.35
PRE6YOL038W COX10P21592 462 aa6.64□□□□□ -1.35
PRE6YOL038W LSO2Q3E772 92 aaKnown RBP6.64□□□□□ -1.35
PRE6YOL038W RGM1Q00453 211 aa6.63□□□□□ -1.35
PRE6YOL038W NHP2P32495 156 aaPredicted RBP6.62□□□□□ -1.35
PRE6YOL038W KNH1P50112 268 aa6.62□□□□□ -1.35
PRE6YOL038W YGL193CP53097 103 aa6.62□□□□□ -1.35
PRE6YOL038W RPL26AP05743 127 aaKnown RBP6.61□□□□□ -1.35
PRE6YOL038W HYP2P23301 157 aaKnown RBP6.61□□□□□ -1.35
PRE6YOL038W RPL26BP53221 127 aaKnown RBP6.61□□□□□ -1.35
PRE6YOL038W ARO2P28777 376 aaKnown RBP6.59□□□□□ -1.35
PRE6YOL038W POP7P38291 140 aa6.59□□□□□ -1.35
PRE6YOL038W YGL149WP53116 101 aa6.59□□□□□ -1.35
PRE6YOL038W YLR156WP0CE96 114 aa6.58□□□□□ -1.36
PRE6YOL038W YLR159WP0CE97 114 aa6.58□□□□□ -1.36
PRE6YOL038W YLR161WP0CE98 114 aa6.58□□□□□ -1.36
PRE6YOL038W UBC4P15731 148 aa6.58□□□□□ -1.36
PRE6YOL038W MET32Q12041 191 aa6.58□□□□□ -1.36
PRE6YOL038W YKL023C-AQ2V2P3 75 aa6.58□□□□□ -1.36
PRE6YOL038W IRC21Q04772 201 aa6.57□□□□□ -1.36
PRE6YOL038W YLR415CO13578 112 aa6.56□□□□□ -1.36
PRE6YOL038W ICY1Q04329 127 aa6.56□□□□□ -1.36
PRE6YOL038W YLR296WQ05898 108 aa6.56□□□□□ -1.36
PRE6YOL038W LSM6Q06406 86 aaKnown RBP6.56□□□□□ -1.36
PRE6YOL038W YNL162W-AQ3E7A8 72 aa6.54□□□□□ -1.36
PRE6YOL038W YER039C-AP0CD97 72 aa6.53□□□□□ -1.36
PRE6YOL038W CPR1P14832 162 aaKnown RBP6.52□□□□□ -1.37
PRE6YOL038W MRPL24P36525 258 aaPredicted RBP6.52□□□□□ -1.37
PRE6YOL038W MHR1Q06630 226 aa6.52□□□□□ -1.37
PRE6YOL038W HUR1P45820 110 aa6.51□□□□□ -1.37
PRE6YOL038W YIL102C-AQ2V2P5 75 aa6.51□□□□□ -1.37
PRE6YOL038W YPL257WQ08974 193 aa6.5□□□□□ -1.37
PRE6YOL038W YOR034C-AQ3E735 80 aa6.5□□□□□ -1.37
PRE6YOL038W YNL042W-BQ3E7Z2 85 aa6.5□□□□□ -1.37
PRE6YOL038W DDR2P89113 61 aa6.49□□□□□ -1.37
PRE6YOL038W YOR268CQ08734 132 aa6.49□□□□□ -1.37
PRE6YOL038W YJL127C-BQ3E828 52 aa6.49□□□□□ -1.37
PRE6YOL038W UIP3P39547 235 aa6.48□□□□□ -1.37
PRE6YOL038W YBR230W-AQ3E762 66 aa6.48□□□□□ -1.37
PRE6YOL038W FYV5P25585 152 aa6.47□□□□□ -1.37
PRE6YOL038W EDC2P40023 145 aaPredicted RBP6.47□□□□□ -1.37
PRE6YOL038W YLR236CA0A023PZG4 107 aa6.46□□□□□ -1.38
PRE6YOL038W SPT4P32914 102 aaPredicted RBP6.46□□□□□ -1.38
PRE6YOL038W YPR170W-BP0C5R9 85 aa6.44□□□□□ -1.38
PRE6YOL038W YNL198CP40166 100 aa6.42□□□□□ -1.38
PRE6YOL038W MPC3P53311 146 aa6.41□□□□□ -1.38
PRE6YOL038W BET1P22804 142 aa6.4□□□□□ -1.38
PRE6YOL038W SOH1P38633 127 aa6.4□□□□□ -1.38
PRE6YOL038W SFT1P43682 97 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms