RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W MBF1O14467 151 aaKnown RBP-0.47□□□□□ -2.48
PRP39YML046W RPL29P05747 59 aaPredicted RBP-0.47□□□□□ -2.48
PRP39YML046W YGL014C-AP0C5N1 53 aa-0.47□□□□□ -2.48
PRP39YML046W MRPL31P14063 131 aaPredicted RBP-0.47□□□□□ -2.48
PRP39YML046W RPS1BP23248 255 aaKnown RBP-0.47□□□□□ -2.48
PRP39YML046W CNB1P25296 175 aa-0.47□□□□□ -2.48
PRP39YML046W SRP21P32342 167 aa-0.47□□□□□ -2.48
PRP39YML046W NUF2P33895 451 aa-0.47□□□□□ -2.48
PRP39YML046W RTC3P38804 111 aaPredicted RBP-0.47□□□□□ -2.48
PRP39YML046W YAR029WP39549 74 aa-0.47□□□□□ -2.48
PRP39YML046W SBH1P52870 82 aa-0.47□□□□□ -2.48
PRP39YML046W PGA1P53896 198 aa-0.47□□□□□ -2.48
PRP39YML046W NMA1Q06178 401 aaKnown RBP-0.47□□□□□ -2.48
PRP39YML046W INO4P13902 151 aa-0.48□□□□□ -2.49
PRP39YML046W FYV4P38783 130 aaPredicted RBP-0.48□□□□□ -2.49
PRP39YML046W SRP14P38985 146 aa-0.48□□□□□ -2.49
PRP39YML046W FMC1P40491 155 aa-0.48□□□□□ -2.49
PRP39YML046W YGR201CP42936 225 aa-0.48□□□□□ -2.49
PRP39YML046W ICS3P47034 131 aa-0.48□□□□□ -2.49
PRP39YML046W BSC4P53841 131 aa-0.48□□□□□ -2.49
PRP39YML046W GRX5Q02784 150 aa-0.48□□□□□ -2.49
PRP39YML046W EST3Q03096 181 aa-0.48□□□□□ -2.49
PRP39YML046W YOR385WQ08909 290 aa-0.48□□□□□ -2.49
PRP39YML046W YBR200W-AQ3E755 54 aa-0.48□□□□□ -2.49
PRP39YML046W YBR072C-AQ3E794 53 aa-0.48□□□□□ -2.49
PRP39YML046W YFR009W-AP0C5M9 85 aa-0.48□□□□□ -2.49
PRP39YML046W MRPL11P36521 249 aaPredicted RBP-0.48□□□□□ -2.49
PRP39YML046W RTT105P40063 208 aa-0.48□□□□□ -2.49
PRP39YML046W GPI11Q06636 219 aa-0.48□□□□□ -2.49
PRP39YML046W YOL118CQ08259 102 aa-0.48□□□□□ -2.49
PRP39YML046W YLR053CQ12026 108 aa-0.48□□□□□ -2.49
PRP39YML046W YKL023C-AQ2V2P3 75 aa-0.48□□□□□ -2.49
PRP39YML046W YLR412C-AQ3E742 68 aa-0.48□□□□□ -2.49
PRP39YML046W YCR108CQ3E819 63 aa-0.48□□□□□ -2.49
PRP39YML046W ATP7P30902 174 aa-0.49□□□□□ -2.49
PRP39YML046W RPS20P38701 121 aaKnown RBP-0.49□□□□□ -2.49
PRP39YML046W EDC1P53080 175 aaPredicted RBP-0.49□□□□□ -2.49
PRP39YML046W VPS28Q02767 242 aa-0.49□□□□□ -2.49
PRP39YML046W SYM1Q06563 197 aa-0.49□□□□□ -2.49
PRP39YML046W PAM18Q07914 168 aa-0.49□□□□□ -2.49
PRP39YML046W YAL065CO13511 128 aa-0.5□□□□□ -2.49
PRP39YML046W NHP6AP11632 93 aaKnown RBP-0.5□□□□□ -2.49
PRP39YML046W FPR2P32472 135 aa-0.5□□□□□ -2.49
PRP39YML046W PDX3P38075 228 aaKnown RBP-0.5□□□□□ -2.49
PRP39YML046W TMA22P47089 198 aaPredicted RBP-0.5□□□□□ -2.49
PRP39YML046W NKP2Q06162 153 aa-0.5□□□□□ -2.49
PRP39YML046W HPA2Q06592 156 aa-0.5□□□□□ -2.49
PRP39YML046W YLR031WQ07978 186 aa-0.5□□□□□ -2.49
PRP39YML046W YIL002W-AQ3E7Z5 69 aa-0.5□□□□□ -2.49
PRP39YML046W RAD6P06104 172 aa-0.5□□□□□ -2.49
PRP39YML046W MRS1P07266 363 aa-0.5□□□□□ -2.49
PRP39YML046W PAU19P0CE85 124 aa-0.5□□□□□ -2.49
PRP39YML046W PAU21P0CE86 164 aa-0.5□□□□□ -2.49
PRP39YML046W PAU22P0CE87 164 aa-0.5□□□□□ -2.49
PRP39YML046W PAU3P25610 124 aa-0.5□□□□□ -2.49
PRP39YML046W RFA3P26755 122 aaKnown RBP-0.5□□□□□ -2.49
PRP39YML046W YER085CP40058 173 aa-0.5□□□□□ -2.49
PRP39YML046W YNL198CP40166 100 aa-0.5□□□□□ -2.49
PRP39YML046W PAU15P40585 124 aa-0.5□□□□□ -2.49
PRP39YML046W PHS1P40857 217 aa-0.5□□□□□ -2.49
PRP39YML046W HHO1P53551 258 aa-0.5□□□□□ -2.49
PRP39YML046W TIM11P81449 96 aaPredicted RBP-0.5□□□□□ -2.49
PRP39YML046W LIP1Q03579 150 aa-0.5□□□□□ -2.49
PRP39YML046W YJL133C-AQ3E7A3 74 aa-0.5□□□□□ -2.49
PRP39YML046W PAU16P35994 123 aa-0.51□□□□□ -2.49
PRP39YML046W SFT2P38166 215 aa-0.51□□□□□ -2.49
PRP39YML046W RUB1Q03919 77 aa-0.51□□□□□ -2.49
PRP39YML046W YKL183C-AQ3E765 70 aa-0.51□□□□□ -2.49
PRP39YML046W YIL134C-AQ45U18 67 aa-0.51□□□□□ -2.49
PRP39YML046W MED11Q99278 115 aa-0.51□□□□□ -2.49
PRP39YML046W GCV3P39726 170 aaPredicted RBP-0.52□□□□□ -2.49
PRP39YML046W FYV7Q12247 151 aa-0.52□□□□□ -2.49
PRP39YML046W YLR361C-AQ3E795 98 aa-0.52□□□□□ -2.49
PRP39YML046W YPR014CQ6B0W2 109 aa-0.52□□□□□ -2.49
PRP39YML046W YLR365WQ7LIF2 110 aa-0.52□□□□□ -2.49
PRP39YML046W RPL22AP05749 121 aaKnown RBP-0.52□□□□□ -2.49
PRP39YML046W PFY1P07274 126 aa-0.52□□□□□ -2.49
PRP39YML046W VMA10P48836 114 aaKnown RBP-0.52□□□□□ -2.49
PRP39YML046W YDR246W-AQ3E763 66 aa-0.52□□□□□ -2.49
PRP39YML046W YPR108W-AQ3E7B3 70 aa-0.52□□□□□ -2.49
PRP39YML046W RPL36BO14455 100 aaKnown RBP-0.53□□□□□ -2.49
PRP39YML046W YBR121C-AP0C5L4 52 aa-0.53□□□□□ -2.49
PRP39YML046W FYV5P25585 152 aa-0.53□□□□□ -2.49
PRP39YML046W YLR296WQ05898 108 aa-0.53□□□□□ -2.49
PRP39YML046W YOL131WQ08270 108 aa-0.53□□□□□ -2.49
PRP39YML046W AHC2P25649 128 aa-0.54□□□□□ -2.5
PRP39YML046W VMA7P39111 118 aa-0.54□□□□□ -2.5
PRP39YML046W HPM1P40481 377 aa-0.54□□□□□ -2.5
PRP39YML046W TOS6P48560 102 aa-0.54□□□□□ -2.5
PRP39YML046W YCL001W-AP87012 153 aa-0.54□□□□□ -2.5
PRP39YML046W SPC2Q04969 178 aa-0.54□□□□□ -2.5
PRP39YML046W FCF2Q12035 217 aaPredicted RBP-0.54□□□□□ -2.5
PRP39YML046W DAD1Q12248 94 aa-0.54□□□□□ -2.5
PRP39YML046W PAU17Q12370 124 aa-0.54□□□□□ -2.5
PRP39YML046W YDR381C-AQ3E6R5 114 aa-0.54□□□□□ -2.5
PRP39YML046W YOR316C-AQ3E806 69 aa-0.54□□□□□ -2.5
PRP39YML046W PET20Q99373 253 aa-0.54□□□□□ -2.5
PRP39YML046W ARG80P07249 177 aa-0.54□□□□□ -2.5
PRP39YML046W GSP1P32835 219 aaKnown RBP-0.54□□□□□ -2.5
PRP39YML046W RSM18P40033 138 aa-0.54□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms