RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	SAE3	P89114	91 aa		10.53	□□□□□ -0.72
CCC1	YLR220W	UGX2	P32772	223 aa		10.52	□□□□□ -0.73
CCC1	YLR220W	CWP2	P43497	92 aa		10.52	□□□□□ -0.73
CCC1	YLR220W	LCL2	Q08045	131 aa		10.52	□□□□□ -0.73
CCC1	YLR220W	MBF1	O14467	151 aa	Known RBP	10.51	□□□□□ -0.73
CCC1	YLR220W	SNA2	P56508	79 aa		10.51	□□□□□ -0.73
CCC1	YLR220W	YDR029W	Q12111	104 aa		10.51	□□□□□ -0.73
CCC1	YLR220W	YNL190W	P53872	204 aa		10.49	□□□□□ -0.73
CCC1	YLR220W	OXA1	P39952	402 aa		10.48	□□□□□ -0.73
CCC1	YLR220W	YFR057W	P43625	151 aa		10.48	□□□□□ -0.73
CCC1	YLR220W	AQY2	P0CD90	149 aa		10.47	□□□□□ -0.73
CCC1	YLR220W	SMP1	P38128	452 aa		10.47	□□□□□ -0.73
CCC1	YLR220W	STF1	P01098	86 aa		10.46	□□□□□ -0.73
CCC1	YLR220W	UBC11	P52492	156 aa		10.46	□□□□□ -0.73
CCC1	YLR220W	CDC43	P18898	376 aa		10.45	□□□□□ -0.74
CCC1	YLR220W	MVB12	P42939	101 aa		10.44	□□□□□ -0.74
CCC1	YLR220W	SMD1	Q02260	146 aa	Predicted RBP	10.44	□□□□□ -0.74
CCC1	YLR220W	YLL006W-A	Q3E814	58 aa		10.43	□□□□□ -0.74
CCC1	YLR220W	ABF2	Q02486	183 aa		10.42	□□□□□ -0.74
CCC1	YLR220W	ELC1	Q03071	99 aa		10.4	□□□□□ -0.74
CCC1	YLR220W	RPL29	P05747	59 aa	Predicted RBP	10.39	□□□□□ -0.75
CCC1	YLR220W	YFL019C	P43576	117 aa		10.39	□□□□□ -0.75
CCC1	YLR220W	YLR363W-A	Q3E747	85 aa		10.39	□□□□□ -0.75
CCC1	YLR220W	YBL039W-B	P0C268	59 aa		10.38	□□□□□ -0.75
CCC1	YLR220W	PEX22	P39718	180 aa		10.38	□□□□□ -0.75
CCC1	YLR220W	YGL041C-B	Q3E750	60 aa		10.38	□□□□□ -0.75
CCC1	YLR220W	YML079W	Q03629	201 aa		10.37	□□□□□ -0.75
CCC1	YLR220W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	10.36	□□□□□ -0.75	not detected
CCC1	YLR220W	MID2	P36027	376 aa		10.35	□□□□□ -0.75
CCC1	YLR220W	HPA2	Q06592	156 aa		10.35	□□□□□ -0.75
CCC1	YLR220W	ECM12	O13529	151 aa		10.34	□□□□□ -0.75
CCC1	YLR220W	RGM1	Q00453	211 aa		10.34	□□□□□ -0.75
CCC1	YLR220W	YOR020W-A	Q3E824	90 aa		10.33	□□□□□ -0.76
CCC1	YLR220W	AIM19	P40502	157 aa		10.32	□□□□□ -0.76
CCC1	YLR220W	GLC8	P41818	229 aa		10.32	□□□□□ -0.76
CCC1	YLR220W	IGD1	P43598	195 aa		10.32	□□□□□ -0.76
CCC1	YLR220W	YIA6	P40556	373 aa		10.31	□□□□□ -0.76
CCC1	YLR220W	YLR307C-A	Q3E825	87 aa		10.29	□□□□□ -0.76
CCC1	YLR220W	YKL023C-A	Q2V2P3	75 aa		10.28	□□□□□ -0.76
CCC1	YLR220W	Q0032	Q9ZZX7	96 aa		10.28	□□□□□ -0.76
CCC1	YLR220W	YLR296W	Q05898	108 aa		10.27	□□□□□ -0.77
CCC1	YLR220W	UBC4	P15731	148 aa		10.26	□□□□□ -0.77
CCC1	YLR220W	YER181C	P40097	107 aa		10.26	□□□□□ -0.77
CCC1	YLR220W	LSO2	Q3E772	92 aa	Known RBP	10.26	□□□□□ -0.77
CCC1	YLR220W	CWC27	Q02770	301 aa		10.25	□□□□□ -0.77
CCC1	YLR220W	LCL1	Q02786	101 aa		10.25	□□□□□ -0.77
CCC1	YLR220W	YNL162W-A	Q3E7A8	72 aa		10.25	□□□□□ -0.77
CCC1	YLR220W	COX10	P21592	462 aa		10.24	□□□□□ -0.77
CCC1	YLR220W	KNH1	P50112	268 aa		10.24	□□□□□ -0.77
CCC1	YLR220W	CPR1	P14832	162 aa	Known RBP	10.22	□□□□□ -0.77
CCC1	YLR220W	YHR130C	P38834	111 aa		10.22	□□□□□ -0.77
CCC1	YLR220W	PAI3	P01094	68 aa		10.21	□□□□□ -0.77
CCC1	YLR220W	POP7	P38291	140 aa		10.21	□□□□□ -0.77
CCC1	YLR220W	YGL193C	P53097	103 aa		10.21	□□□□□ -0.77
CCC1	YLR220W	IRC21	Q04772	201 aa		10.21	□□□□□ -0.77
CCC1	YLR220W	ICY1	Q04329	127 aa		10.2	□□□□□ -0.78
CCC1	YLR220W	EOS1	P53938	366 aa		10.17	□□□□□ -0.78
CCC1	YLR220W	ARO2	P28777	376 aa	Known RBP	10.16	□□□□□ -0.78
CCC1	YLR220W	LSM6	Q06406	86 aa	Known RBP	10.16	□□□□□ -0.78
CCC1	YLR220W	NHP2	P32495	156 aa	Predicted RBP	10.15	□□□□□ -0.78
CCC1	YLR220W	YIL102C-A	Q2V2P5	75 aa		10.13	□□□□□ -0.79
CCC1	YLR220W	RPL26A	P05743	127 aa	Known RBP	10.12	□□□□□ -0.79
CCC1	YLR220W	YPR170W-B	P0C5R9	85 aa		10.12	□□□□□ -0.79
CCC1	YLR220W	RPL26B	P53221	127 aa	Known RBP	10.12	□□□□□ -0.79
CCC1	YLR220W	SAP30	P38429	201 aa		10.1	□□□□□ -0.79
CCC1	YLR220W	MRPL24	P36525	258 aa	Predicted RBP	10.07	□□□□□ -0.8
CCC1	YLR220W	MMS2	P53152	137 aa		10.07	□□□□□ -0.8
CCC1	YLR220W	YOR034C-A	Q3E735	80 aa		10.07	□□□□□ -0.8
CCC1	YLR220W	YNL042W-B	Q3E7Z2	85 aa		10.07	□□□□□ -0.8
CCC1	YLR220W	YLR236C	A0A023PZG4	107 aa		10.06	□□□□□ -0.8
CCC1	YLR220W	MHR1	Q06630	226 aa		10.06	□□□□□ -0.8
CCC1	YLR220W	YBR230W-A	Q3E762	66 aa		10.05	□□□□□ -0.8
CCC1	YLR220W	YER039C-A	P0CD97	72 aa		10.04	□□□□□ -0.8
CCC1	YLR220W	YPL257W	Q08974	193 aa		10.04	□□□□□ -0.8
CCC1	YLR220W	YNL198C	P40166	100 aa		10.03	□□□□□ -0.8
CCC1	YLR220W	HUR1	P45820	110 aa		10.03	□□□□□ -0.8
CCC1	YLR220W	FYV5	P25585	152 aa		10.02	□□□□□ -0.81
CCC1	YLR220W	YJL127C-B	Q3E828	52 aa		10.02	□□□□□ -0.81
CCC1	YLR220W	MSA2	P36157	363 aa		10.01	□□□□□ -0.81
CCC1	YLR220W	UIP3	P39547	235 aa		10.01	□□□□□ -0.81
CCC1	YLR220W	MET32	Q12041	191 aa		10.01	□□□□□ -0.81
CCC1	YLR220W	SPT4	P32914	102 aa	Predicted RBP	10	□□□□□ -0.81
CCC1	YLR220W	YBL112C	Q3E7Y4	105 aa		10	□□□□□ -0.81
CCC1	YLR220W	ISU2	Q12056	156 aa		9.98	□□□□□ -0.81
CCC1	YLR220W	YLR415C	O13578	112 aa		9.96	□□□□□ -0.82
CCC1	YLR220W	DDR2	P89113	61 aa		9.96	□□□□□ -0.82
CCC1	YLR220W	HYP2	P23301	157 aa	Known RBP	9.94	□□□□□ -0.82
CCC1	YLR220W	YLR156W	P0CE96	114 aa		9.93	□□□□□ -0.82
CCC1	YLR220W	YLR159W	P0CE97	114 aa		9.93	□□□□□ -0.82
CCC1	YLR220W	YLR161W	P0CE98	114 aa		9.93	□□□□□ -0.82
CCC1	YLR220W	EDC2	P40023	145 aa	Predicted RBP	9.91	□□□□□ -0.82
CCC1	YLR220W	MPC3	P53311	146 aa		9.91	□□□□□ -0.82
CCC1	YLR220W	YGR121W-A	Q3E816	71 aa		9.91	□□□□□ -0.82
CCC1	YLR220W	DDR48	P18899	430 aa	Known RBP	9.89	□□□□□ -0.83
CCC1	YLR220W	SFT1	P43682	97 aa		9.87	□□□□□ -0.83
CCC1	YLR220W	SPG1	P50088	95 aa		9.86	□□□□□ -0.83
CCC1	YLR220W	DUT1	P33317	147 aa		9.85	□□□□□ -0.83
CCC1	YLR220W	YFL067W	P43537	175 aa		9.85	□□□□□ -0.83
CCC1	YLR220W	BSC4	P53841	131 aa		9.83	□□□□□ -0.84
CCC1	YLR220W	BET1	P22804	142 aa		9.82	□□□□□ -0.84

Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms