RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C YDR029WQ12111 104 aa6.69□□□□□ -1.34
MET28YIR017C YPL229WQ99395 206 aa6.69□□□□□ -1.34
MET28YIR017C YEL067CP39978 195 aa6.68□□□□□ -1.34
MET28YIR017C SMD1Q02260 146 aaPredicted RBP6.68□□□□□ -1.34
MET28YIR017C CDC43P18898 376 aa6.67□□□□□ -1.34
MET28YIR017C YNR077CP53758 84 aa6.67□□□□□ -1.34
MET28YIR017C ABF2Q02486 183 aa6.67□□□□□ -1.34
MET28YIR017C PAU23Q07987 124 aa6.67□□□□□ -1.34
MET28YIR017C PAU17Q12370 124 aa6.67□□□□□ -1.34
MET28YIR017C AQY2P0CD90 149 aa6.66□□□□□ -1.34
MET28YIR017C UGX2P32772 223 aa6.66□□□□□ -1.34
MET28YIR017C OXA1P39952 402 aa6.66□□□□□ -1.34
MET28YIR017C CWP2P43497 92 aa6.65□□□□□ -1.34
MET28YIR017C LCL2Q08045 131 aa6.65□□□□□ -1.34
MET28YIR017C YFR057WP43625 151 aa6.64□□□□□ -1.35
MET28YIR017C YML079WQ03629 201 aa6.64□□□□□ -1.35
MET28YIR017C MBF1O14467 151 aaKnown RBP6.63□□□□□ -1.35
MET28YIR017C YNL190WP53872 204 aa6.63□□□□□ -1.35
MET28YIR017C ELC1Q03071 99 aa6.63□□□□□ -1.35
MET28YIR017C YGL041C-BQ3E750 60 aa6.63□□□□□ -1.35
MET28YIR017C MVB12P42939 101 aa6.62□□□□□ -1.35
MET28YIR017C GLC8P41818 229 aa6.61□□□□□ -1.35
MET28YIR017C YLR363W-AQ3E747 85 aa6.61□□□□□ -1.35
MET28YIR017C YLL006W-AQ3E814 58 aa6.61□□□□□ -1.35
MET28YIR017C YBL039W-BP0C268 59 aa6.59□□□□□ -1.35
MET28YIR017C YFL019CP43576 117 aa6.59□□□□□ -1.35
MET28YIR017C UBC11P52492 156 aa6.59□□□□□ -1.35
MET28YIR017C ECM12O13529 151 aa6.58□□□□□ -1.36
MET28YIR017C MID2P36027 376 aa6.58□□□□□ -1.36
MET28YIR017C CWC27Q02770 301 aa6.58□□□□□ -1.36
MET28YIR017C Q0032Q9ZZX7 96 aa6.58□□□□□ -1.36
MET28YIR017C STF1P01098 86 aa6.57□□□□□ -1.36
MET28YIR017C SMP1P38128 452 aa6.57□□□□□ -1.36
MET28YIR017C PEX22P39718 180 aa6.57□□□□□ -1.36
MET28YIR017C YIA6P40556 373 aa6.56□□□□□ -1.36
MET28YIR017C HPA2Q06592 156 aa6.56□□□□□ -1.36
MET28YIR017C GIS2P53849 153 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
MET28YIR017C LSO2Q3E772 92 aaKnown RBP6.55□□□□□ -1.36
MET28YIR017C YOR020W-AQ3E824 90 aa6.55□□□□□ -1.36
MET28YIR017C RPL29P05747 59 aaPredicted RBP6.54□□□□□ -1.36
MET28YIR017C YER181CP40097 107 aa6.54□□□□□ -1.36
MET28YIR017C AIM19P40502 157 aa6.53□□□□□ -1.36
MET28YIR017C RGM1Q00453 211 aa6.53□□□□□ -1.36
MET28YIR017C LCL1Q02786 101 aa6.53□□□□□ -1.36
MET28YIR017C COX10P21592 462 aa6.52□□□□□ -1.37
MET28YIR017C YHR130CP38834 111 aa6.52□□□□□ -1.37
MET28YIR017C PAI3P01094 68 aa6.51□□□□□ -1.37
MET28YIR017C YLR307C-AQ3E825 87 aa6.51□□□□□ -1.37
MET28YIR017C KNH1P50112 268 aa6.5□□□□□ -1.37
MET28YIR017C NHP2P32495 156 aaPredicted RBP6.49□□□□□ -1.37
MET28YIR017C IGD1P43598 195 aa6.49□□□□□ -1.37
MET28YIR017C RPL26AP05743 127 aaKnown RBP6.48□□□□□ -1.37
MET28YIR017C POP7P38291 140 aa6.48□□□□□ -1.37
MET28YIR017C RPL26BP53221 127 aaKnown RBP6.48□□□□□ -1.37
MET28YIR017C YKL023C-AQ2V2P3 75 aa6.48□□□□□ -1.37
MET28YIR017C UBC4P15731 148 aa6.47□□□□□ -1.37
MET28YIR017C ARO2P28777 376 aaKnown RBP6.47□□□□□ -1.37
MET28YIR017C EOS1P53938 366 aa6.47□□□□□ -1.37
MET28YIR017C YLR296WQ05898 108 aa6.47□□□□□ -1.37
MET28YIR017C IRC21Q04772 201 aa6.46□□□□□ -1.38
MET28YIR017C ICY1Q04329 127 aa6.45□□□□□ -1.38
MET28YIR017C LSM6Q06406 86 aaKnown RBP6.45□□□□□ -1.38
MET28YIR017C YNL162W-AQ3E7A8 72 aa6.45□□□□□ -1.38
MET28YIR017C YGL193CP53097 103 aa6.44□□□□□ -1.38
MET28YIR017C MMS2P53152 137 aa6.44□□□□□ -1.38
MET28YIR017C CPR1P14832 162 aaKnown RBP6.43□□□□□ -1.38
MET28YIR017C YIL102C-AQ2V2P5 75 aa6.42□□□□□ -1.38
MET28YIR017C YER039C-AP0CD97 72 aa6.41□□□□□ -1.38
MET28YIR017C MRPL24P36525 258 aaPredicted RBP6.4□□□□□ -1.38
MET28YIR017C HUR1P45820 110 aa6.4□□□□□ -1.38
MET28YIR017C YNL042W-BQ3E7Z2 85 aa6.39□□□□□ -1.39
MET28YIR017C UIP3P39547 235 aa6.38□□□□□ -1.39
MET28YIR017C YPL257WQ08974 193 aa6.38□□□□□ -1.39
MET28YIR017C YOR034C-AQ3E735 80 aa6.38□□□□□ -1.39
MET28YIR017C YJL127C-BQ3E828 52 aa6.37□□□□□ -1.39
MET28YIR017C YPR170W-BP0C5R9 85 aa6.36□□□□□ -1.39
MET28YIR017C YBR230W-AQ3E762 66 aa6.36□□□□□ -1.39
MET28YIR017C YBL112CQ3E7Y4 105 aa6.36□□□□□ -1.39
MET28YIR017C FYV5P25585 152 aa6.35□□□□□ -1.39
MET28YIR017C DDR2P89113 61 aa6.35□□□□□ -1.39
MET28YIR017C MHR1Q06630 226 aa6.35□□□□□ -1.39
MET28YIR017C SPT4P32914 102 aaPredicted RBP6.34□□□□□ -1.39
MET28YIR017C YLR236CA0A023PZG4 107 aa6.33□□□□□ -1.4
MET28YIR017C YLR415CO13578 112 aa6.33□□□□□ -1.4
MET28YIR017C YNL198CP40166 100 aa6.33□□□□□ -1.4
MET28YIR017C HYP2P23301 157 aaKnown RBP6.32□□□□□ -1.4
MET28YIR017C MSA2P36157 363 aa6.3□□□□□ -1.4
MET28YIR017C YLR156WP0CE96 114 aa6.29□□□□□ -1.4
MET28YIR017C YLR159WP0CE97 114 aa6.29□□□□□ -1.4
MET28YIR017C YLR161WP0CE98 114 aa6.29□□□□□ -1.4
MET28YIR017C DDR48P18899 430 aaKnown RBP6.29□□□□□ -1.4
MET28YIR017C YFL067WP43537 175 aa6.29□□□□□ -1.4
MET28YIR017C SFT1P43682 97 aa6.29□□□□□ -1.4
MET28YIR017C MPC3P53311 146 aa6.29□□□□□ -1.4
MET28YIR017C BET1P22804 142 aa6.27□□□□□ -1.41
MET28YIR017C EDC2P40023 145 aaPredicted RBP6.27□□□□□ -1.41
MET28YIR017C SPG1P50088 95 aa6.26□□□□□ -1.41
MET28YIR017C BSC4P53841 131 aa6.26□□□□□ -1.41
MET28YIR017C YGR121W-AQ3E816 71 aa6.26□□□□□ -1.41
MET28YIR017C SOH1P38633 127 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms