RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 PAEPP09466 180 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 VDRP11473 427 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 PLCB2Q00722 1185 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 PRKCQQ04759 706 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 MLF2Q15773 248 aaPredicted RBP18■□□□□ 0.47
LIN28B-202ENST00000635857 ARHGAP29Q52LW3 1261 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 ARHGAP17Q68EM7 881 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 POTEHQ6S545 545 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 IRF2BP1Q8IU81 584 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 GPIHBP1Q8IV16 184 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 CRACR2AQ9BSW2 395 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 DUSP16Q9BY84 665 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 NACA2Q9H009 215 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 NDST4Q9H3R1 872 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 TMEM30AQ9NV96 361 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 TMEM63CQ9P1W3 806 aa18■□□□□ 0.47
LIN28B-202ENST00000635857 CHADO15335 359 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 LETM1O95202 739 aaPredicted RBP17.99■□□□□ 0.47
LIN28B-202ENST00000635857 KRT5P13647 590 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 HDCP19113 662 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 BCAT1P54687 386 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 MYL5Q02045 173 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 TYRO3Q06418 890 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 ZNF268Q14587 947 aaPredicted RBP17.99■□□□□ 0.47
LIN28B-202ENST00000635857 STILQ15468 1287 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 GOLGA7BQ2TAP0 167 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 VWA3BQ502W6 1294 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 TCP11X2Q5H9J9 407 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 TRIM65Q6PJ69 517 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 ARHGEF19Q8IW93 802 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 RBBP8NLQ8NC74 664 aaPredicted RBP17.99■□□□□ 0.47
LIN28B-202ENST00000635857 LMO3Q8TAP4 145 aa17.99■□□□□ 0.47
LIN28B-202ENST00000635857 SMG9Q9H0W8 520 aaKnown RBP17.99■□□□□ 0.47
LIN28B-202ENST00000635857 UBE2TQ9NPD8 197 aaPredicted RBP17.99■□□□□ 0.47
LIN28B-202ENST00000635857 TLR8Q9NR97 1041 aaKnown RBP17.99■□□□□ 0.47
LIN28B-202ENST00000635857 SAMSN1Q9NSI8 373 aaKnown RBP17.99■□□□□ 0.47
LIN28B-202ENST00000635857 ANAPC1Q9H1A4 1944 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 C2orf78A6NCI8 922 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 ZNF840PA6NDX5 716 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 TNFRSF10BO14763 440 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 BEST1O76090 585 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 ACO1P21399 889 aaKnown RBP17.98■□□□□ 0.47
LIN28B-202ENST00000635857 FCHO2Q0JRZ9 810 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 KLHL40Q2TBA0 621 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 SLC44A4Q53GD3 710 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 ASTLQ6HA08 431 aaPredicted RBP17.98■□□□□ 0.47
LIN28B-202ENST00000635857 C11orf57Q6ZUT1 292 aaPredicted RBP17.98■□□□□ 0.47
LIN28B-202ENST00000635857 ARL14EPQ8N8R7 260 aaPredicted RBP17.98■□□□□ 0.47
LIN28B-202ENST00000635857 ANKRD52Q8NB46 1076 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 ZMIZ2Q8NF64 920 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 SCAMP5Q8TAC9 235 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 TBC1D17Q9HA65 648 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 APEX2Q9UBZ4 518 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 TSPAN16Q9UKR8 245 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 MRPS17Q9Y2R5 130 aaKnown RBP17.98■□□□□ 0.47
LIN28B-202ENST00000635857 HELZP42694 1942 aaKnown RBP17.98■□□□□ 0.47
LIN28B-202ENST00000635857 NCANO14594 1321 aa17.98■□□□□ 0.47
LIN28B-202ENST00000635857 KRBA1A5PL33 1030 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 PDGFBP01127 241 aaPredicted RBP17.97■□□□□ 0.47
LIN28B-202ENST00000635857 MBL2P11226 248 aaPredicted RBP17.97■□□□□ 0.47
LIN28B-202ENST00000635857 CDK11BP21127 795 aaKnown RBP17.97■□□□□ 0.47
LIN28B-202ENST00000635857 USP8P40818 1118 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 KPNA1P52294 538 aaPredicted RBP17.97■□□□□ 0.47
LIN28B-202ENST00000635857 BST2Q10589 180 aaKnown RBP17.97■□□□□ 0.47
LIN28B-202ENST00000635857 HECTD3Q5T447 861 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 TPRG1Q6ZUI0 275 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 DDX42Q86XP3 938 aaKnown RBP eCLIP17.97■□□□□ 0.47
LIN28B-202ENST00000635857 UBR7Q8N806 425 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 KAT5Q92993 513 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 USP13Q92995 863 aaPredicted RBP17.97■□□□□ 0.47
LIN28B-202ENST00000635857 PRRX2Q99811 253 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 TRPV5Q9NQA5 729 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 HEBP1Q9NRV9 189 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 GMIPQ9P107 970 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 TICRRQ7Z2Z1 1910 aa17.97■□□□□ 0.47
LIN28B-202ENST00000635857 MAN2B1O00754 1011 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 SETSIPP0DME0 302 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 SLC9A1P19634 815 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 COL9A1P20849 921 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 CLCN5P51795 746 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 MTF1Q14872 753 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 ARHGAP44Q17R89 818 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 FKBP15Q5T1M5 1219 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 PHLDB3Q6NSJ2 640 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 C1orf228Q6PIY5 440 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 ZNF852Q6ZMS4 543 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 TADA2BQ86TJ2 420 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 RSPRY1Q96DX4 576 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 MSANTD3Q96H12 275 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 CYP2S1Q96SQ9 504 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 LRRC4Q9HBW1 653 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 TAB2Q9NYJ8 693 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 CHORDC1Q9UHD1 332 aaPredicted RBP17.96■□□□□ 0.47
LIN28B-202ENST00000635857 ARHGAP26Q9UNA1 814 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 SCML2Q9UQR0 700 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 CCL26Q9Y258 94 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 TRIOO75962 3097 aa17.96■□□□□ 0.47
LIN28B-202ENST00000635857 KANSL1LA0AUZ9 987 aa17.95■□□□□ 0.46
LIN28B-202ENST00000635857 M0QYV0 167 aa17.95■□□□□ 0.46
LIN28B-202ENST00000635857 XPO1O14980 1071 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms