RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 PRR23AA6NEV1 266 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 MAGEB2O15479 319 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 ALOX15P16050 662 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-218ENST00000635120 XKR3Q5GH77 459 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 SEL1L3Q68CR1 1132 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 MYCBPAPQ8TBZ2 947 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 RSPH1Q8WYR4 309 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 RAD18Q9NS91 495 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 TUBGCP4Q9UGJ1 667 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 MAGEA13PA6NCF6 341 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 STX5Q13190 355 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 NOTUMQ6P988 496 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 COL23A1Q86Y22 540 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-218ENST00000635120 LRRC71Q8N4P6 559 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 UTP6Q9NYH9 597 aaKnown RBP9.43□□□□□ -0.9
CSMD1-218ENST00000635120 DCDC2Q9UHG0 476 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 GNG14A0A1W2PPG7 69 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 RPS6KA4O75676 772 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 DARSP14868 501 aaKnown RBP9.43□□□□□ -0.9
CSMD1-218ENST00000635120 KCNMA1Q12791 1236 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 TSGA10IPQ3SY00 556 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 KDM7AQ6ZMT4 941 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 ARL10Q8N8L6 244 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 ELP3Q9H9T3 547 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 SCUBE2Q9NQ36 999 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 PHTF1Q9UMS5 762 aa9.43□□□□□ -0.9
CSMD1-218ENST00000635120 ATG4AQ8WYN0 398 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 KCTD14Q9BQ13 255 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 ZSWIM1Q9BR11 485 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 MOV10L1Q9BXT6 1211 aaKnown RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 PIF1Q9H611 641 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 TARBP1Q13395 1621 aaKnown RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 E9PBE3 544 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 KLHL41O60662 606 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 NDUFB10O96000 172 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 FLT3P36888 993 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 PRR36Q9H6K5 1346 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 PARNO95453 639 aaKnown RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 PAX7P23759 505 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 NUP62P37198 522 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 TFDP3Q5H9I0 405 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 ERAP2Q6P179 960 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 DENND1BQ6P3S1 775 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 GJB7Q6PEY0 223 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 NLRP9Q7RTR0 991 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 IGDCC4Q8TDY8 1250 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 SYN2Q92777 582 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 NMD3Q96D46 503 aaKnown RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 UPP2O95045 317 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 PSMA3P25788 255 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 FDFT1P37268 417 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 NAPEPLDQ6IQ20 393 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 PIPSLA2A3N6 862 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 POU1F1P28069 291 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 FOXO4P98177 505 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 C19orf18Q8NEA5 215 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 UBE2OQ9C0C9 1292 aaKnown RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 CCNG1P51959 295 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 CDC42EP1Q00587 391 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 UGT3A1Q6NUS8 523 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 C11orf88Q6PI97 169 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 TDRD5Q8NAT2 981 aaKnown RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 ANKS1AQ92625 1134 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 EPS8L2Q9H6S3 715 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 VCPKMTQ9H867 229 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 VPS26AO75436 327 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 ALDH1A2O94788 518 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 NPEPPSP55786 919 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 MTDHQ86UE4 582 aaKnown RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 LPAR1Q92633 364 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 CYP4F12Q9HCS2 524 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 SYBUQ9NX95 663 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 TMCC3Q9ULS5 477 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 PXDNLA1KZ92 1463 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 ITGA4P13612 1032 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 FAM84BQ96KN1 310 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 C6orf62Q9GZU0 229 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 VWA5AO00534 786 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 C2CD2LO14523 706 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 TMEM253P0C7T8 217 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 RFC5P40937 340 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 BAATQ14032 418 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 HIST2H2ACQ16777 129 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 HIST2H2AA3Q6FI13 130 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 SERHL2Q9H4I8 314 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 SERHLQ9NQF3 203 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 TBX20Q9UMR3 447 aa9.42□□□□□ -0.9
CSMD1-218ENST00000635120 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-218ENST00000635120 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-218ENST00000635120 PRKCQQ04759 706 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 DGKDQ16760 1214 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 CENPTQ96BT3 561 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 C19orf60Q96EN9 201 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 HDHD2Q9H0R4 259 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
CSMD1-218ENST00000635120 TULP4Q9NRJ4 1543 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 KIAA1210Q9ULL0 1709 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 MEI4A8MW99 385 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 FDX1P10109 184 aa9.41□□□□□ -0.9
CSMD1-218ENST00000635120 SARSP49591 514 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms