RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 GPR32O75388 356 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 NOL4O94818 638 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 APBB3O95704 486 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 BAG2O95816 211 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 SFTPCP11686 197 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 NMT1P30419 496 aaKnown RBP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 MATR3P43243 847 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 EFNA5P52803 228 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 SLC12A2P55011 1212 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 SARNPP82979 210 aaKnown RBP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 MLLT1Q03111 559 aaPredicted RBP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 FAAP100Q0VG06 881 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 PPP2R5DQ14738 602 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 PSMD6Q15008 389 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 SETMARQ53H47 684 aaPredicted RBP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 CCDC81Q6ZN84 652 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 HAUS6Q7Z4H7 955 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 VPS36Q86VN1 386 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 FNIP1Q8TF40 1166 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 SCFD1Q8WVM8 642 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 CAVIN3Q969G5 261 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 OSMRQ99650 979 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 FDXACB1Q9BRP7 624 aaPredicted RBP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 CHCHD6Q9BRQ6 235 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 TLR10Q9BXR5 811 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 NFKBIZQ9BYH8 718 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 CELF4Q9BZC1 486 aaKnown RBP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 ADAMTS10Q9H324 1103 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 TMEM39AQ9NV64 488 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 TRAF3IP3Q9Y228 551 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 CRYL1Q9Y2S2 319 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 TRIP12Q14669 1992 aaPredicted RBP12.2□□□□□ -0.46
LINC00538-201ENST00000626109 EVPLQ92817 2033 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 DENND3A2RUS2 1198 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 BUB1O43683 1085 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 MT-ND3P03897 115 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 CKBP12277 381 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 CRYBB1P53674 252 aaPredicted RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 PTENP60484 403 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 KNOP1Q1ED39 458 aaKnown RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 ZNF720Q7Z2F6 126 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 TMEM161BQ8NDZ6 487 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 FIZ1Q96SL8 496 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 GPATCH1Q9BRR8 931 aaKnown RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 HTATIP2Q9BUP3 242 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 HIPK3Q9H422 1215 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 ST6GALNAC4Q9H4F1 302 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 ARMCX3Q9UH62 379 aaPredicted RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 ADGRA3Q8IWK6 1321 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 INO80B-WBP1J3KQ70 363 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 K7ERI5 159 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 PDXKO00764 312 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 EIF3DO15371 548 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 NCAM2O15394 837 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 CLASP2O75122 1294 aaKnown RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 PALMO75781 387 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 MYBP10242 640 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 SELPP16109 830 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 EIF4BP23588 611 aaKnown RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 NR2F2P24468 414 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 GUCA2AQ02747 115 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 MGAT3Q09327 533 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 MINDY4Q4G0A6 757 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 ANKRD39Q53RE8 183 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 FAM26DQ5JW98 314 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 ZNF618Q5T7W0 954 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 BNC2Q6ZN30 1099 aaPredicted RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 RAPH1Q70E73 1250 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 DNAJB7Q7Z6W7 309 aaPredicted RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 GLIS3Q8NEA6 775 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 CITED4Q96RK1 184 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 TARS2Q9BW92 718 aaKnown RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 FGFBP2Q9BYJ0 223 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 FAM107BQ9H098 131 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 OSGEPQ9NPF4 335 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
LINC00538-201ENST00000626109 ABCF3Q9NUQ8 709 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 TBX21Q9UL17 535 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 PCDHGC3Q9UN70 934 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 PCDHGC5Q9Y5F6 944 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 MYH11P35749 1972 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 UBE4BO95155 1302 aa12.19□□□□□ -0.46
LINC00538-201ENST00000626109 F8VZ95 297 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 TLR5O60602 858 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 CSPG5O95196 566 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 CHRNA1P02708 482 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 MYBL2P10244 700 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 EPB41P11171 864 aaKnown RBP12.18□□□□□ -0.46
LINC00538-201ENST00000626109 DARSP14868 501 aaKnown RBP12.18□□□□□ -0.46
LINC00538-201ENST00000626109 CXCR5P32302 372 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 SKIV2L2P42285 1042 aaKnown RBP12.18□□□□□ -0.46
LINC00538-201ENST00000626109 CASP5P51878 434 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 TNNC1P63316 161 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 GTF2BQ00403 316 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 MAPK6Q16659 721 aa12.18□□□□□ -0.46
LINC00538-201ENST00000626109 ZC2HC1CQ53FD0 456 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms