RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 DDX20Q9UHI6 824 aaKnown RBP4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 C4AP0C0L4 1744 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 MRC1P22897 1456 aa4.48□□□□□ -1.69
CKS1BP3-201ENST00000600888 KDM6AO15550 1401 aaPredicted RBP4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 VSTM5A8MXK1 200 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 POLRMTO00411 1230 aaKnown RBP4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 KIF20AO95235 890 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 ITGAMP11215 1152 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 FDXRP22570 491 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 ANXA11P50995 505 aaKnown RBP4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 RPS7P62081 194 aaKnown RBP4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 GPSM2P81274 684 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 DPTQ07507 201 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 TCF15Q12870 199 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 LLGL1Q15334 1064 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 CD300EQ496F6 205 aaPredicted RBP4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 SULT6B1Q6IMI4 303 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 TAPT1Q6NXT6 567 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 SLC30A10Q6XR72 485 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 TMPRSS9Q7Z410 1059 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 LCORLQ8N3X6 602 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 POC1BQ8TC44 478 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 PTCD3Q96EY7 689 aaKnown RBP4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 MRGPRX1Q96LB2 322 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 SORCS2Q96PQ0 1159 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 CNPPD1Q9BV87 410 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 TINAGL1Q9GZM7 467 aaPredicted RBP4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 CYP4F11Q9HBI6 524 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 CNNM1Q9NRU3 951 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 TBCCD1Q9NVR7 557 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 ETAA1Q9NY74 926 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 TMOD3Q9NYL9 352 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 TFCP2L1Q9NZI6 479 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 CHPF2Q9P2E5 772 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 L1RE1Q9UN81 338 aa4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 BRCA1P38398 1863 aaKnown RBP4.47□□□□□ -1.69
CKS1BP3-201ENST00000600888 TRGV11A0A075B6L2 103 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 GRID2IPA4D2P6 1211 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 CAPN8A6NHC0 703 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 A6NNZ2 444 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 E7ENX8 843 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 FOXN1O15353 648 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 GATA3P23771 443 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 KCNJ5P48544 419 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 USP14P54578 494 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 BLOC1S1P78537 153 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 MC2RQ01718 297 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 TAP2Q03519 686 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 GRM3Q14832 879 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 C1orf141Q5JVX7 400 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 CC2D1BQ5T0F9 858 aaKnown RBP4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 ZNF530Q6P9A1 599 aaPredicted RBP4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 Q6YL49 198 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 MAEAQ7L5Y9 396 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 PPP1R32Q7Z5V6 425 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 COL23A1Q86Y22 540 aaPredicted RBP4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 LDLRAD3Q86YD5 345 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 PCSK9Q8NBP7 692 aaKnown RBP4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 TMEM125Q96AQ2 219 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 Q96MF0 132 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 COQ10AQ96MF6 247 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 SYT17Q9BSW7 474 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 TTPALQ9BTX7 342 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 FAM204AQ9H8W3 233 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 ZMAT3Q9HA38 289 aaKnown RBP4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 ATP6V0A4Q9HBG4 840 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 PIH1D1Q9NWS0 290 aaKnown RBP4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 SYBUQ9NX95 663 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 OBP2AQ9NY56 170 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 TESQ9UGI8 421 aaKnown RBP4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 ASAP1Q9ULH1 1129 aa4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.46□□□□□ -1.7
CKS1BP3-201ENST00000600888 AFDNP55196 1824 aaKnown RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 ARFGEF1Q9Y6D6 1849 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 A0A1W2PPL8 197 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 FAM227AF5H4B4 570 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 M0QYG6 137 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 TOR1BO14657 336 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 VPS4BO75351 444 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 DNAJB5O75953 348 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 HKR1P10072 659 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 KITP10721 976 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 PIM1P11309 404 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 TGM1P22735 817 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 AVPR1BP47901 424 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 TOB1P50616 345 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 INHBCP55103 352 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 TGFB2P61812 414 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 ITPK1Q13572 414 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 GBX1Q14549 363 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 HLXQ14774 488 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 FAM160B1Q5W0V3 765 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 SWSAP1Q6NVH7 229 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 TAF2Q6P1X5 1199 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 MICALCLQ6ZW33 695 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 CHST15Q7LFX5 561 aaPredicted RBP4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 MRGPRGQ86SM5 289 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 ADGRG5Q8IZF4 528 aa4.45□□□□□ -1.7
CKS1BP3-201ENST00000600888 PSD4Q8NDX1 1056 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms