RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CCT6BQ92526 530 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 USP6NLQ92738 828 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 MAGEB18Q96M61 343 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 PLCD4Q9BRC7 762 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 OSBPL7Q9BZF2 842 aa20.05■□□□□ 0.8
PRKCSH-209ENST00000589838 SLC18A1P54219 525 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 IL9RQ01113 521 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 SLC6A3Q01959 620 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 ROR1Q01973 937 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 KRT81Q14533 505 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 ZBTB6Q15916 424 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 ANKRD20A8PQ5CZ79 823 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 TRABD2AQ86V40 505 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 PACS2Q86VP3 889 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 VSIG1Q86XK7 387 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 ATP11CQ8NB49 1132 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 SPATA18Q8TC71 538 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 TBCBQ99426 244 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 SLC4A5Q9BY07 1137 aa20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 FAM49AQ9H0Q0 323 aaPredicted RBP20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.04■□□□□ 0.8
PRKCSH-209ENST00000589838 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 FAM47DPA6NHR8 397 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 TCP11X1B4DZS4 312 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 POC1B-GALNT4F8VUJ3 575 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 GPR32O75388 356 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 ATP2A2P16615 1042 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 NOMO1Q15155 1222 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 PKDCCQ504Y2 493 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 PPP1R26Q5T8A7 1209 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 DARS2Q6PI48 645 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 TMEM110Q86TL2 294 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 UNC45BQ8IWX7 931 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 CNPY4Q8N129 248 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 PEBP4Q96S96 227 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 UBQLN1Q9UMX0 589 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 SMG5Q9UPR3 1016 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 A6NJR5 290 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 E7ESA3 106 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 XPOTO43592 962 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 SNX3O60493 162 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 ITGBL1O95965 494 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 CD4P01730 458 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 SDC4P31431 198 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 GDF10P55107 478 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 PDE4CQ08493 712 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 FASTKD3Q14CZ7 662 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 TAF5Q15542 800 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 ARHGAP17Q68EM7 881 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 ACOT1Q86TX2 421 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 PDIK1LQ8N165 341 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 C12orf29Q8N999 325 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 MRPL45Q9BRJ2 306 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 TRIM6Q9C030 488 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 CNTN3Q9P232 1028 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 PSMC3IPQ9P2W1 217 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 GINS2Q9Y248 185 aa20.03■□□□□ 0.8
PRKCSH-209ENST00000589838 SCN1AP35498 2009 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 ZNF236Q9UL36 1845 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 CFAP69A5D8W1 941 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 PRPF4O43172 522 aaKnown RBP eCLIP20.02■□□□□ 0.82e-6■■□□□ 12.5
PRKCSH-209ENST00000589838 DYNC1LI2O43237 492 aaPredicted RBP20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 CAPN15O75808 1086 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 SUN1O94901 812 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 SMIM10L2AP0DMW4 78 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 SMIM10L2BP0DMW5 78 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 CYP2C9P11712 490 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 DARSP14868 501 aaKnown RBP20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 KRT15P19012 456 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 GCAP28676 217 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 RGS7P49802 495 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 DPYSL3Q14195 570 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 CCDC14Q49A88 953 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 FAM71DQ8N9W8 422 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 SLC35F5Q8WV83 523 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 GRAMD1AQ96CP6 724 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 RNF157Q96PX1 679 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 SMC6Q96SB8 1091 aa20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 ZMYND8Q9ULU4 1186 aaPredicted RBP20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 USP15Q9Y4E8 981 aaPredicted RBP20.02■□□□□ 0.8
PRKCSH-209ENST00000589838 GOLGA8MH3BSY2 632 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 GSTA1P08263 222 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 TGM2P21980 687 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 GEMIN4P57678 1058 aaKnown RBP20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 RNASELQ05823 741 aaKnown RBP20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 MPP2Q14168 576 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 C15orf59Q2T9L4 293 aaPredicted RBP20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 KLHL38Q2WGJ6 581 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 EFHC2Q5JST6 749 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 NUGGCQ68CJ6 796 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 PMF1Q6P1K2 205 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 OLFML1Q6UWY5 402 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 ALKAL1Q6UXT8 129 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 PALM2Q8IXS6 379 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 OR6B3Q8NGW1 331 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 NPLOC4Q8TAT6 608 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 ZMAT2Q96NC0 199 aaKnown RBP20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 TRABDQ9H4I3 376 aa20.01■□□□□ 0.79
PRKCSH-209ENST00000589838 MBLAC1A4D2B0 266 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms