RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 MTMR10Q9NXD2 777 aa16.77■□□□□ 0.28
CSNK1D-212ENST00000580061 ZDHHC7Q9NXF8 308 aa16.77■□□□□ 0.28
CSNK1D-212ENST00000580061 TAS2R14Q9NYV8 317 aa16.77■□□□□ 0.28
CSNK1D-212ENST00000580061 NAGPAQ9UK23 515 aa16.77■□□□□ 0.28
CSNK1D-212ENST00000580061 OBSL1O75147 1896 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 FAM170AA1A519 330 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 SLC38A8A6NNN8 435 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 NCK2O43639 380 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 RTN2O75298 545 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 PAPLNO95428 1278 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 HNRNPA1P09651 372 aaKnown RBP eCLIP16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 MMP8P22894 467 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 ACADSBP45954 432 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 NSFP46459 744 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 CCZ1BP86790 482 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 CCZ1P86791 482 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 MTF1Q14872 753 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 COL19A1Q14993 1142 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 VEPH1Q14D04 833 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 CTC1Q2NKJ3 1217 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 PPP1R2P3Q6NXS1 205 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 ALKBH5Q6P6C2 394 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 RAD9BQ6WBX8 426 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 DENND5BQ6ZUT9 1274 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 TMEM110Q86TL2 294 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 PHF13Q86YI8 300 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 MICALL1Q8N3F8 863 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 PSMG2Q969U7 264 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 ISCUQ9H1K1 167 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 LRRC4Q9HBW1 653 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 ST7Q9NRC1 585 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 IL37Q9NZH6 218 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 TJP2Q9UDY2 1190 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 ASB3Q9Y575 518 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 EPN1Q9Y6I3 576 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 USP3Q9Y6I4 520 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 DENND4CQ5VZ89 1909 aa16.76■□□□□ 0.27
CSNK1D-212ENST00000580061 DOCK6Q96HP0 2047 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 TMCO5BA8MYB1 307 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 E5RJQ4 531 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 PIK3R2O00459 728 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 CCL16O15467 120 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 RTN3O95197 1032 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 LCA5LO95447 670 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 POU2F2P09086 479 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 CSH1P0DML2 217 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 CSH2P0DML3 217 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 SRGAP2BP0DMP2 458 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 FOSL2P15408 326 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 CYLC1P35663 651 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 TKTL1P51854 596 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 USP46P62068 366 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 ADIGQ0VDE8 80 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 PTP4A2Q12974 167 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 MTMR3Q13615 1198 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 CCDC122Q5T0U0 273 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 DNAJB7Q7Z6W7 309 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 ITIH5Q86UX2 942 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 SCAMP5Q8TAC9 235 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 TTLL2Q9BWV7 592 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 SFXN1Q9H9B4 322 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 COMMD8Q9NX08 183 aa16.75■□□□□ 0.27
CSNK1D-212ENST00000580061 NOTCH4Q99466 2003 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 EYSQ5T1H1 3165 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 CCDC195A0A1B0GUA6 201 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 FAM92AA1XBS5 289 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 EIF3CLB5ME19 914 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 ZNF263O14978 683 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 NDUFA10O95299 355 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 FTLP02792 175 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 ERBB2P04626 1255 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 LCP1P13796 627 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 HMGA1P17096 107 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 GABRB2P47870 512 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 SNX16P57768 344 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 ANKRD54Q6NXT1 300 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 MMS22LQ6ZRQ5 1243 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 MON1BQ7L1V2 547 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 DNAAF5Q86Y56 855 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 SIX6OS1Q8N1H7 587 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 ELMOD1Q8N336 334 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 MSANTD4Q8NCY6 345 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 CMASQ8NFW8 434 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 ZNF707Q96C28 371 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 C18orf8Q96DM3 657 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 PABPC5Q96DU9 382 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 TRMT2BQ96GJ1 504 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 MYRFLQ96LU7 910 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 ZNF512Q96ME7 567 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 EIF3CQ99613 913 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 C11orf70Q9BRQ4 267 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 PRKD2Q9BZL6 878 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 FBXO44Q9H4M3 255 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 CNGB3Q9NQW8 809 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 EHD2Q9NZN4 543 aa16.74■□□□□ 0.27
CSNK1D-212ENST00000580061 ADAM22Q9P0K1 906 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms