RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 LPAL2Q16609 132 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 MAN2A1Q16706 1144 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 ZNF699Q32M78 642 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 WDR72Q3MJ13 1102 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 TCP11X2Q5H9J9 407 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 ZNF667Q5HYK9 610 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 NAIF1Q69YI7 327 aaPredicted RBP16.67■□□□□ 0.26
USB1-208ENST00000563207 PKN3Q6P5Z2 889 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 CREBRFQ8IUR6 639 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 TAS1R2Q8TE23 839 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 ATRIPQ8WXE1 791 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 RUBCNQ92622 972 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 FAM124BQ9H5Z6 455 aaPredicted RBP16.67■□□□□ 0.26
USB1-208ENST00000563207 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 HPS4Q9NQG7 708 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 POLR3BQ9NW08 1133 aaPredicted RBP16.67■□□□□ 0.26
USB1-208ENST00000563207 FANCLQ9NW38 375 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 GPR179Q6PRD1 2367 aa16.67■□□□□ 0.26
USB1-208ENST00000563207 TACC1O75410 805 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 FGF19O95750 216 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 TPM2P07951 284 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 ARSAP15289 507 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 LHX1P48742 406 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 MYL7Q01449 175 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 SMARCB1Q12824 385 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 NCAPHQ15003 741 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 LRSAM1Q6UWE0 723 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 SCN4BQ8IWT1 228 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 AOPEPQ8N6M6 819 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 FAM83CQ9BQN1 747 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 MRPL45Q9BRJ2 306 aaKnown RBP16.66■□□□□ 0.26
USB1-208ENST00000563207 TUBGCP2Q9BSJ2 902 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 EBF3Q9H4W6 596 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 PCDHGA2Q9Y5H1 932 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 ATG2BQ96BY7 2078 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 PTPRDP23468 1912 aa16.66■□□□□ 0.26
USB1-208ENST00000563207 GTPBP10A4D1E9 387 aaKnown RBP16.65■□□□□ 0.26
USB1-208ENST00000563207 WEE1P30291 646 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 TPM4P67936 248 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 NFE2Q16621 373 aaPredicted RBP16.65■□□□□ 0.26
USB1-208ENST00000563207 FAM171BQ6P995 826 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 SPATA2LQ8IUW3 424 aaPredicted RBP16.65■□□□□ 0.26
USB1-208ENST00000563207 DHX40Q8IX18 779 aaKnown RBP16.65■□□□□ 0.26
USB1-208ENST00000563207 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 CELF5Q8N6W0 485 aaKnown RBP16.65■□□□□ 0.26
USB1-208ENST00000563207 TTC16Q8NEE8 873 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 MYLPFQ96A32 169 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 GCNAQ96QF7 691 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 SYT15Q9BQS2 421 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 FBRSL1Q9HCM7 1045 aaKnown RBP16.65■□□□□ 0.26
USB1-208ENST00000563207 OBP2AQ9NY56 170 aa16.65■□□□□ 0.26
USB1-208ENST00000563207 C2orf78A6NCI8 922 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 CHURC1-FNTBB4DL54 471 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 NOL4O94818 638 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 ZNF18P17022 549 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 CDK11BP21127 795 aaKnown RBP16.64■□□□□ 0.25
USB1-208ENST00000563207 BDNFP23560 247 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 FNTBP49356 437 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 CACNA2D1P54289 1103 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 MLLT6P55198 1093 aaPredicted RBP16.64■□□□□ 0.25
USB1-208ENST00000563207 ZNF445P59923 1031 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 USP46P62068 366 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 NOP14P78316 857 aaKnown RBP16.64■□□□□ 0.25
USB1-208ENST00000563207 IQCB1Q15051 598 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 VWA3BQ502W6 1294 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 HEATR6Q6AI08 1181 aaKnown RBP16.64■□□□□ 0.25
USB1-208ENST00000563207 MON1AQ86VX9 555 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 RALGPS2Q86X27 583 aaPredicted RBP16.64■□□□□ 0.25
USB1-208ENST00000563207 EPC1Q9H2F5 836 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 NDST4Q9H3R1 872 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 DPEP3Q9H4B8 488 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 C8orf33Q9H7E9 229 aaPredicted RBP16.64■□□□□ 0.25
USB1-208ENST00000563207 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 TRPC7Q9HCX4 862 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 TDP1Q9NUW8 608 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 TMEM30AQ9NV96 361 aa16.64■□□□□ 0.25
USB1-208ENST00000563207 NXF1Q9UBU9 619 aaKnown RBP16.64■□□□□ 0.25
USB1-208ENST00000563207 SMG5Q9UPR3 1016 aaKnown RBP16.64■□□□□ 0.25
USB1-208ENST00000563207 ANTXRLA6NF34 631 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 K7ESF4 209 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 HRO43593 1189 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 CLSTN1O94985 981 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 CSH1P0DML2 217 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 CSH2P0DML3 217 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 TGM1P22735 817 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 WARSP23381 471 aaKnown RBP16.63■□□□□ 0.25
USB1-208ENST00000563207 PCSK1P29120 753 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 AVPR1AP37288 418 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 CXCL12P48061 93 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 ZXDBP98169 803 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 CCINQ13939 588 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 ITPRIPL2Q3MIP1 535 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 SMYD5Q6GMV2 418 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms