RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 PDE12Q6L8Q7 609 aaKnown RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 BEND5Q7L4P6 421 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 PIGZQ86VD9 579 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 METTL23Q86XA0 190 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 NIPA2Q8N8Q9 360 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 C3orf20Q8ND61 904 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 STKLD1Q8NE28 680 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 TRMT2BQ96GJ1 504 aaKnown RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 HSFY1Q96LI6 401 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 RAB6CQ9H0N0 254 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 OSGEPQ9NPF4 335 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 ASNSD1Q9NWL6 643 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 PDE4DIPQ5VU43 2346 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 MYLKQ15746 1914 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 TMEM191CA6NGB0 347 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 I6L893 689 aaPredicted RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 GJB6O95452 261 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 CCDC172P0C7W6 258 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 RRM1P23921 792 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 ADORA2BP29275 332 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 CREMQ03060 361 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 MLLT1Q03111 559 aaPredicted RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 ADGRE1Q14246 886 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 CTC1Q2NKJ3 1217 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 PRSS36Q5K4E3 855 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 VSTM1Q6UX27 236 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 MMS22LQ6ZRQ5 1243 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 HFE2Q6ZVN8 426 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 ATAD1Q8NBU5 361 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 SPPL2BQ8TCT7 592 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 ZNF707Q96C28 371 aaPredicted RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 TMEM169Q96HH4 297 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 TCF25Q9BQ70 676 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 COMMD8Q9NX08 183 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 NEU3Q9UQ49 428 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 CAPN6Q9Y6Q1 641 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 GRID2IPA4D2P6 1211 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 TPM1P09493 284 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 TFE3P19532 575 aaPredicted RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 OR1D2P34982 312 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 DAOAP59103 153 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 ZNF268Q14587 947 aaPredicted RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 TAF5Q15542 800 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 MAPRE1Q15691 268 aaKnown RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 CYP4A22Q5TCH4 519 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 THEM5Q8N1Q8 247 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 JOSD2Q8TAC2 188 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 HDAC7Q8WUI4 952 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 TIFAQ96CG3 184 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 CCDC42Q96M95 316 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 ZNF334Q9HCZ1 680 aaPredicted RBP7.13□□□□□ -1.27
LINC00517-202ENST00000554257 SCML2Q9UQR0 700 aa7.13□□□□□ -1.27
LINC00517-202ENST00000554257 C2CD4BA6NLJ0 364 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 SIGLEC16A6NMB1 481 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 RFXAPO00287 272 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 ZNF500O60304 480 aaPredicted RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 GREM1O60565 184 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 AP1G2O75843 785 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 OLFM2O95897 454 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 TNFAIP3P21580 790 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 HOXA9P31269 272 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 USP8P40818 1118 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 ARSEP51690 589 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 MAP3K7CLP57077 242 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 RPL7AP62424 266 aaKnown RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 GPM6BQ13491 265 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 CCDC122Q5T0U0 273 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 RTL10Q7L3V2 364 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 SLC26A9Q7LBE3 791 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 DCP1BQ8IZD4 617 aaKnown RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 SCAMP5Q8TAC9 235 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 NDRG1Q92597 394 aaKnown RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 MRPL38Q96DV4 380 aaKnown RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 ZFRQ96KR1 1074 aaKnown RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 ZBED2Q9BTP6 218 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 NGRNQ9NPE2 291 aaKnown RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 ANLNQ9NQW6 1124 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 MRPL17Q9NRX2 175 aaKnown RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 PCDHB5Q9Y5E4 795 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 CEP290O15078 2479 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 F8VP50 259 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 FAM200BP0CF97 657 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 MYBL1P10243 752 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 GTF2F1P35269 517 aaKnown RBP eCLIP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 CYLC1P35663 651 aaPredicted RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 SLC5A3P53794 718 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 RBM10P98175 930 aaKnown RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 HYAL1Q12794 435 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 PPP2R2DQ66LE6 453 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 CEP57Q86XR8 500 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 TMEM35BQ8NCS4 154 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 TPCN2Q8NHX9 752 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 FAM71BQ8TC56 605 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 PGAP3Q96FM1 320 aaPredicted RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 IRX2Q9BZI1 471 aaPredicted RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 NMUR1Q9HB89 426 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 DMAP1Q9NPF5 467 aaPredicted RBP7.12□□□□□ -1.27
LINC00517-202ENST00000554257 LMCD1Q9NZU5 365 aa7.12□□□□□ -1.27
LINC00517-202ENST00000554257 CHORDC1Q9UHD1 332 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms