RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ADCY1Q08828 1119 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 ADIGQ0VDE8 80 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 KLF1Q13351 362 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 C15orf59Q2T9L4 293 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 TMCO3Q6UWJ1 677 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 CCNI2Q6ZMN8 369 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 RAPGEF5Q92565 580 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 MYLPFQ96A32 169 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 CFAP57Q96MR6 1250 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 KCNK16Q96T55 309 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 TMLHEQ9NVH6 421 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 HCSTQ9UBK5 93 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 NRP1O14786 923 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 PHF2O75151 1096 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 AP1G2O75843 785 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 RNF8O76064 485 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 SEC31AO94979 1220 aaKnown RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 MYBL2P10244 700 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 YWHAHQ04917 246 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 RAB6CQ53S08 254 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 BEND6Q5SZJ8 279 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 CCDC50Q8IVM0 306 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 RNF25Q96BH1 459 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 SLITRK1Q96PX8 696 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 OSBPL8Q9BZF1 889 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 RAB6CQ9H0N0 254 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 CSNK1G1Q9HCP0 422 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 ARFGAP3Q9NP61 516 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 GDF3Q9NR23 364 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 MTUS1Q9ULD2 1270 aa20.52■□□□□ 0.88
RBFOX1-215ENST00000553186 PI4K2BG5E9Z4 385 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 OAZ2O95190 189 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 THEM5Q8N1Q8 247 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 ACSF2Q96CM8 615 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 SMARCD1Q96GM5 515 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 RBM41Q96IZ5 413 aaKnown RBP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 DDX56Q9NY93 547 aaKnown RBP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 BHMG1C9JSJ3 638 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 KRT1P04264 644 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 KRT7P08729 469 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 GUCY2DQ02846 1103 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 HADHQ16836 314 aaKnown RBP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 MFSD7Q6UXD7 560 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 CYP4V2Q6ZWL3 525 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 CCDC26Q8TAB7 109 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 C11orf84Q9BUA3 381 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 HEMGNQ9BXL5 484 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 RHOBTB2Q9BYZ6 727 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 USP18Q9UMW8 372 aa20.51■□□□□ 0.87
RBFOX1-215ENST00000553186 KIAA0100Q14667 2235 aaKnown RBP20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 C3orf70A6NLC5 250 aaPredicted RBP20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 HHLA1C9JL84 531 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 TRAPPC3O43617 180 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 ERLIN1O75477 346 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 TADA2AO75478 443 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 CHRNA3P32297 505 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 NDUFV1P49821 464 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 RABGGTBP53611 331 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 SMC1AQ14683 1233 aaKnown RBP20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 SMTNL2Q2TAL5 461 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 KCNT1Q5JUK3 1230 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 TTC27Q6P3X3 843 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 CNKSR3Q6P9H4 555 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 MAATS1Q7Z4T9 603 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 C12orf50Q8NA57 414 aaPredicted RBP20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 NDRG1Q92597 394 aaKnown RBP20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 MAGOHBQ96A72 148 aaKnown RBP20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 PEBP4Q96S96 227 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 UBXN6Q9BZV1 441 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 ZWILCHQ9H900 591 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 EPB41L5Q9HCM4 733 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 MARCH5Q9NX47 278 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 PCSK1NQ9UHG2 260 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 ADAM28Q9UKQ2 775 aa20.5■□□□□ 0.87
RBFOX1-215ENST00000553186 TTI1O43156 1089 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 TRUB2O95900 331 aaKnown RBP20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 ALDH2P05091 517 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 ITGB8P26012 769 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 TNFRSF8P28908 595 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 SDC4P31431 198 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 SLC11A1P49279 550 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 COPS2P61201 443 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 MRPS5P82675 430 aaKnown RBP20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 ATP11AP98196 1134 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 RAB41Q5JT25 222 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 MRPL9Q9BYD2 267 aaKnown RBP20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 LRRC19Q9H756 370 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 LRRC4Q9HBW1 653 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 PCYOX1Q9UHG3 505 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 ESYT3A0FGR9 886 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 TBKBP1A7MCY6 615 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 PTPN7P35236 360 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 CDKN2BP42772 138 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 PTPN9P43378 593 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 ADCY2Q08462 1091 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 IKBKEQ14164 716 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 TRADDQ15628 312 aa20.49■□□□□ 0.87
RBFOX1-215ENST00000553186 MAPRE1Q15691 268 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms