RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SMAPO00193 183 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 MAPTP10636 758 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 ETS2P15036 469 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 NCKAP1LP55160 1127 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 NLRP11P59045 1033 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 TMPRSS15P98073 1019 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 EFHC2Q5JST6 749 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 C1orf146Q5VVC0 180 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 FOXB2Q5VYV0 432 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 TDRD10Q5VZ19 366 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SCARA3Q6AZY7 606 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 ERO1BQ86YB8 467 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 B4GALNT2Q8NHY0 566 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 OXNAD1Q96HP4 312 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SMYD3Q9H7B4 428 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 XPO7Q9UIA9 1087 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 MAGEA13PA6NCF6 341 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 AVILO75366 819 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 CIB2O75838 187 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 RTN3O95197 1032 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 CYP1A1P04798 512 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 GCLCP48506 637 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SGSM1Q2NKQ1 1148 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 TFDP3Q5H9I0 405 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 C6orf163Q5TEZ5 329 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 ENOSF1Q7L5Y1 443 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 PPM1NQ8N819 430 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SERAC1Q96JX3 654 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 MFSD14AQ96MC6 490 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 ACAP3Q96P50 834 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SHCBP1LQ9BZQ2 653 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 PTPRFP10586 1907 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 E5RJQ4 531 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 MAP3K6O95382 1288 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 GTF2H1P32780 548 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 CUL2Q13617 745 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SMAD1Q15797 465 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 LY6KQ17RY6 165 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 KBTBD12Q3ZCT8 623 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SCARA5Q6ZMJ2 495 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 USP50Q70EL3 339 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 NIPA1Q7RTP0 329 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 ARHGAP24Q8N264 748 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 CCDC110Q8TBZ0 833 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SH3TC2Q8TF17 1288 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 CPT1BQ92523 772 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 EPAS1Q99814 870 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 PORCNQ9H237 461 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 APOBEC3GQ9HC16 384 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 SHOC2Q9UQ13 582 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 MTO1Q9Y2Z2 717 aaKnown RBP12.9□□□□□ -0.34
HDAC7-230ENST00000552960 ASB3Q9Y575 518 aa12.9□□□□□ -0.34
HDAC7-230ENST00000552960 MEI4A8MW99 385 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 WDR64B1ANS9 1081 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 I3L4J1 428 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 OPHN1O60890 802 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 ELK3P41970 407 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 OAZ1P54368 228 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 OGDHQ02218 1023 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 KLHL38Q2WGJ6 581 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 PPIL6Q8IXY8 311 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 SMC1BQ8NDV3 1235 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 ZNF606Q8WXB4 792 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 KRT82Q9NSB4 513 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 STX18Q9P2W9 335 aaKnown RBP12.89□□□□□ -0.35
HDAC7-230ENST00000552960 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
HDAC7-230ENST00000552960 LCTP09848 1927 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 PTPRJQ12913 1337 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 KIAA1217Q5T5P2 1943 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 hCG_1818297A0A087WSY0 165 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 COPEO14579 308 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 HNRNPCL1O60812 293 aaKnown RBP12.89□□□□□ -0.35
HDAC7-230ENST00000552960 ACTR2P61160 394 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 OCRLQ01968 901 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 AP1B1Q10567 949 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 ZBTB41Q5SVQ8 909 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 PLEKHA7Q6IQ23 1121 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 GPAT2Q6NUI2 795 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 RBM15BQ8NDT2 890 aaKnown RBP12.89□□□□□ -0.35
HDAC7-230ENST00000552960 LRRN4Q8WUT4 740 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 CCDC124Q96CT7 223 aaKnown RBP12.89□□□□□ -0.35
HDAC7-230ENST00000552960 TUBB6Q9BUF5 446 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 VPS11Q9H270 941 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 TLE6Q9H808 572 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 KCNK13Q9HB14 408 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 PCDH9Q9HC56 1237 aa12.89□□□□□ -0.35
HDAC7-230ENST00000552960 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
HDAC7-230ENST00000552960 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
HDAC7-230ENST00000552960 TXNDC9O14530 226 aa12.88□□□□□ -0.35
HDAC7-230ENST00000552960 CYB561D2O14569 222 aa12.88□□□□□ -0.35
HDAC7-230ENST00000552960 TMEM63AO94886 807 aa12.88□□□□□ -0.35
HDAC7-230ENST00000552960 ARIH2O95376 493 aa12.88□□□□□ -0.35
HDAC7-230ENST00000552960 RPL22P35268 128 aaKnown RBP12.88□□□□□ -0.35
HDAC7-230ENST00000552960 PTP4A2Q12974 167 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms