RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SPDYCQ5MJ68 293 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 HACE1Q8IYU2 909 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 FAM172AQ8WUF8 416 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 VCPIP1Q96JH7 1222 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 XYLT2Q9H1B5 865 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 RGS17Q9UGC6 210 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 ZFP69BQ9UJL9 534 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 STRIP2Q9ULQ0 834 aa14.28□□□□□ -0.12
PRPF40B-209ENST00000548825 ADGRA2Q96PE1 1338 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 CREB3O43889 395 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 GMPRP36959 345 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 ABCG1P45844 678 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 MORF4L2Q15014 288 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 CA9Q16790 459 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 EML3Q32P44 896 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 FAM183BPQ6ZVS7 135 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 XYLT1Q86Y38 959 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 SLC4A11Q8NBS3 891 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 RFWD2Q8NHY2 731 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 C18orf25Q96B23 403 aaPredicted RBP14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 RILPQ96NA2 401 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 PEBP4Q96S96 227 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 ACSS2Q9NR19 701 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 SETD4Q9NVD3 440 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 SNTG2Q9NY99 539 aa14.27□□□□□ -0.12
PRPF40B-209ENST00000548825 CLUHO75153 1309 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 FGFR1P11362 822 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 XRCC4Q13426 336 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 CELF3Q5SZQ8 465 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 ANKRD20A3Q5VUR7 823 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 DPP9Q86TI2 863 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 PRPF39Q86UA1 669 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 FAM131BQ86XD5 332 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 UNC5BQ8IZJ1 945 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 RNF169Q8NCN4 708 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 ADAM32Q8TC27 787 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 NIFKQ9BYG3 293 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 PCDH9Q9HC56 1237 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 PCMTD2Q9NV79 361 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 DDX56Q9NY93 547 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 HESX1Q9UBX0 185 aa14.27□□□□□ -0.13
PRPF40B-209ENST00000548825 A8MXQ7 604 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 TRIM49D1C9J1S8 452 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 EIF4BP23588 611 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 GRIA1P42261 906 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 NME3Q13232 169 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 CCDC6Q16204 474 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 PRAMEF19Q5SWL8 479 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 OTOAQ7RTW8 1153 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 CATSPER4Q7RTX7 472 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 LONP2Q86WA8 852 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 ARMC2Q8NEN0 867 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 MICAL1Q8TDZ2 1067 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 ZNF75CPQ92670 426 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 FAM167AQ96KS9 214 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 TMPRSS4Q9NRS4 437 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 ASNSD1Q9NWL6 643 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 DPP3Q9NY33 737 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 CYB561D2O14569 222 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 CCDC130P13994 396 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 GCAP28676 217 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 SDC4P31431 198 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 GTF2A2P52657 109 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 TTLL4Q14679 1199 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 MTFR1Q15390 333 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 PPP1R26Q5T8A7 1209 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 PPP1R36Q96LQ0 422 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 ACAP3Q96P50 834 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 OSMRQ99650 979 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 SMARCAD1Q9H4L7 1026 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 G3BP2Q9UN86 482 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 COL2A1P02458 1487 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 ENTPD5O75356 428 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 PDHA1P08559 390 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 TROVE2P10155 538 aaKnown RBP eCLIP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 ACAT1P24752 427 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 IREB2P48200 963 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 GRM1Q13255 1194 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 DPYSL3Q14195 570 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 TARBP2Q15633 366 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 OASLQ15646 514 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 NLRP9Q7RTR0 991 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 PTPRN2Q92932 1015 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 OPTNQ96CV9 577 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 TTC25Q96NG3 672 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 TMEM109Q9BVC6 243 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 RXFP1Q9HBX9 757 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 HEY2Q9UBP5 337 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 ZC3H7BQ9UGR2 993 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 CHKBQ9Y259 395 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 STYXL1Q9Y6J8 313 aa14.26□□□□□ -0.13
PRPF40B-209ENST00000548825 SIGLEC16A6NMB1 481 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 GPD1P21695 349 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 TMPRSS15P98073 1019 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 TCEAL1Q15170 157 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 NBPF20Q3BBV1 942 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 PMF1Q6P1K2 205 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms