RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PCSK1NQ9UHG2 260 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 RIPK2O43353 540 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 MICAL2O94851 1124 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
USP35-207ENST00000530546 ZSCAN5DPP0CG00 497 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 MAGEA8P43361 318 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 CCDC15Q0P6D6 951 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 PTK6Q13882 451 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 DGKDQ16760 1214 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 SESTD1Q86VW0 696 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
USP35-207ENST00000530546 RCOR2Q8IZ40 523 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 KIF2BQ8N4N8 673 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 TMEM176AQ96HP8 235 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 TMEM109Q9BVC6 243 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 CDC42EP4Q9H3Q1 356 aaKnown RBP12.11□□□□□ -0.47
USP35-207ENST00000530546 CDHR5Q9HBB8 845 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 DNPEPQ9ULA0 475 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 ZNF148Q9UQR1 794 aa12.11□□□□□ -0.47
USP35-207ENST00000530546 ERBB2P04626 1255 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 RARGP13631 454 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 MAN1A1P33908 653 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 PLCB3Q01970 1234 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 GRB14Q14449 540 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 CCNG2Q16589 344 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 GLRA4Q5JXX5 417 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 SPOCD1Q6ZMY3 1216 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP35-207ENST00000530546 C2orf69Q8N8R5 385 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 SH3TC2Q8TF17 1288 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 STK32AQ8WU08 396 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 PARK7Q99497 189 aaKnown RBP12.1□□□□□ -0.47
USP35-207ENST00000530546 OSMRQ99650 979 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 SYT15Q9BQS2 421 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 ASB7Q9H672 318 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 SNTG2Q9NY99 539 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 WHRNQ9P202 907 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 TP73O15350 636 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 CILPO75339 1184 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 ETS1P14921 441 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 ITIH2P19823 946 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 SP100P23497 879 aaPredicted RBP12.1□□□□□ -0.47
USP35-207ENST00000530546 CDH5P33151 784 aaPredicted RBP12.1□□□□□ -0.47
USP35-207ENST00000530546 NDST1P52848 882 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 IFI35P80217 286 aaPredicted RBP12.1□□□□□ -0.47
USP35-207ENST00000530546 POU5F1BQ06416 359 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 PIGHQ14442 188 aaPredicted RBP12.1□□□□□ -0.47
USP35-207ENST00000530546 IZUMO3Q5VZ72 239 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 SPRYD7Q5W111 196 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 IRGCQ6NXR0 463 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 TMEM154Q6P9G4 183 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 CATSPER4Q7RTX7 472 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 ENDOVQ8N8Q3 282 aaKnown RBP12.1□□□□□ -0.47
USP35-207ENST00000530546 GLIS1Q8NBF1 620 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
USP35-207ENST00000530546 ABHD16BQ9H3Z7 469 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 C10orf88Q9H8K7 445 aa12.1□□□□□ -0.47
USP35-207ENST00000530546 SAE1Q9UBE0 346 aaPredicted RBP12.1□□□□□ -0.47
USP35-207ENST00000530546 PPEF2O14830 753 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 ATP5HO75947 161 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 IVDP26440 423 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 RANBP1P43487 201 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 CNGA2Q16280 664 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
USP35-207ENST00000530546 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
USP35-207ENST00000530546 CXorf38Q8TB03 319 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 SLCO2A1Q92959 643 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 EIF2AQ9BY44 585 aaKnown RBP12.09□□□□□ -0.47
USP35-207ENST00000530546 TXLNGQ9NUQ3 528 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 STRIP2Q9ULQ0 834 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 TJP3O95049 919 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 UNC5CO95185 931 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 P4HA1P13674 534 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 RGS7P49802 495 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 RBP5P82980 135 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 KYNUQ16719 465 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 LONRF1Q17RB8 773 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 TNFAIP8L3Q5GJ75 292 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 TAB3Q8N5C8 712 aaPredicted RBP12.09□□□□□ -0.47
USP35-207ENST00000530546 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 IFT43Q96FT9 208 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 COL1A2P08123 1366 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 GRAP2O75791 330 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 IFNB1P01574 187 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 IL1R2P27930 398 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 TUBP50607 506 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 TAP1Q03518 808 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 P3H1Q32P28 736 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 XYLT1Q86Y38 959 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 PIDD1Q9HB75 910 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 RRAGCQ9HB90 399 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 RPL26L1Q9UNX3 145 aaKnown RBP12.09□□□□□ -0.47
USP35-207ENST00000530546 SLC45A1Q9Y2W3 748 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 MGAMO43451 1857 aa12.09□□□□□ -0.47
USP35-207ENST00000530546 PLXNB2O15031 1838 aa12.08□□□□□ -0.47
USP35-207ENST00000530546 SIGLEC16A6NMB1 481 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms