RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 HID1Q8IV36 788 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 TCEAL8Q8IYN2 117 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 NKAPQ8N5F7 415 aaKnown RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 CFAP61Q8NHU2 1237 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 CALML6Q8TD86 181 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 KIFC2Q96AC6 838 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 REXO5Q96IC2 774 aaKnown RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 VPS39Q96JC1 886 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 SDF4Q9BRK5 362 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 PRO3102Q9H379 93 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 AZI2Q9H6S1 392 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 NEK6Q9HC98 313 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 GLRX2Q9NS18 164 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 SEMA3GQ9NS98 782 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 NOP53Q9NZM5 478 aaKnown RBP7.88□□□□□ -1.15
HDAC3-216ENST00000523088 CEP72Q9P209 647 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 DNM3Q9UQ16 869 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 INPP5FQ9Y2H2 1132 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 MCM3APO60318 1980 aa7.88□□□□□ -1.15
HDAC3-216ENST00000523088 RANBP2P49792 3224 aaKnown RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 PFASO15067 1338 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 EFCAB8A8MWE9 144 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 TARM1B6A8C7 271 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 H3BRB1 525 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 POTEB2H3BUK9 544 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 AXIN1O15169 862 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 PEX10O60683 326 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SERPINB7O75635 380 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 IFNA14P01570 189 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 AKR1A1P14550 325 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 CDC25CP30307 473 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 HADHAP40939 763 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 HNF4AP41235 474 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SLC1A4P43007 532 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 MNX1P50219 401 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 GDI2P50395 445 aaKnown RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SCNN1GP51170 649 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 BEX3Q00994 111 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 TFAP4Q01664 338 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 OTUD4Q01804 1114 aaKnown RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 DNM1Q05193 864 aaKnown RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SCARB2Q14108 478 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 TRIM14Q14142 442 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 GIT2Q14161 759 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 PPA1Q15181 289 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 GFOD2Q3B7J2 385 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 TMEM259Q4ZIN3 620 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 ARHGAP29Q52LW3 1261 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 TDRD12Q587J7 1177 aaKnown RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 AARS2Q5JTZ9 985 aaKnown RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 KIAA1755Q5JYT7 1200 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 C1orf53Q5VUE5 145 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SHEQ5VZ18 495 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SLFN13Q68D06 897 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 PM20D1Q6GTS8 502 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 C4orf50Q6ZRC1 276 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 UNC13DQ70J99 1090 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 RAB11FIP2Q7L804 512 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 WDR49Q8IV35 697 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SCUBE1Q8IWY4 988 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 DENND6BQ8NEG7 585 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 REPS2Q8NFH8 660 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 TEX47Q8TBZ9 253 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 DCAF4Q8WV16 495 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 NSMCE1Q8WV22 266 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 FERMT2Q96AC1 680 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 ZNF274Q96GC6 653 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 MSANTD3Q96H12 275 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 EXOC2Q96KP1 924 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SELENOSQ9BQE4 189 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 EIF2AK1Q9BQI3 630 aaKnown RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 CEP44Q9C0F1 390 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 MRM3Q9HC36 420 aaKnown RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 PRDM5Q9NQX1 630 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 FAIMQ9NVQ4 179 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 FLRT1Q9NZU1 646 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 ZIM2Q9NZV7 527 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 ORC3Q9UBD5 711 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 VTI1BQ9UEU0 232 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 FETUBQ9UGM5 382 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 CD300AQ9UGN4 299 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 SOX13Q9UN79 622 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 STX8Q9UNK0 236 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.87□□□□□ -1.15
HDAC3-216ENST00000523088 NOX1Q9Y5S8 564 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 MYH6P13533 1939 aa7.87□□□□□ -1.15
HDAC3-216ENST00000523088 CYP3A7-CYP3A51PA0A087WV96 503 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 E2F8A0AVK6 867 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 HEATR9A2RTY3 570 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CCDC151A5D8V7 595 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 GOLGA8BA8MQT2 603 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 MIF4GDA9UHW6 222 aaKnown RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 TMEM114B3SHH9 223 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 CAPN9O14815 690 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 HGSO14964 777 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-216ENST00000523088 GPR37O15354 613 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 STX10O60499 249 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 SIN3BO75182 1162 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 ARHGEF15O94989 841 aa7.86□□□□□ -1.15
HDAC3-216ENST00000523088 OXSR1O95747 527 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms