RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 C12orf43Q96C57 262 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 OLFM1Q99784 485 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 NUDT12Q9BQG2 462 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 PSD2Q9BQI7 771 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 RTFDC1Q9BY42 306 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 XAB2Q9HCS7 855 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 PALMDQ9NP74 551 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 PPARGC1AQ9UBK2 798 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 POLIQ9UNA4 740 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 GNEQ9Y223 722 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 TJP1Q07157 1748 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 J3QRK9 145 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 XPO1O14980 1071 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 OR52Z1P0C646 297 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 ATF2P15336 505 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 NDST2P52849 883 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 AP3M2P53677 418 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 EPHA7Q15375 998 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 IFIT1BQ5T764 474 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 TTC23LQ6PF05 361 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 KBTBD6Q86V97 674 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 TMEM151BQ8IW70 566 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 ELMOD1Q8N336 334 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 TCP10LQ8TDR4 215 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 HPS1Q92902 700 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 FBXL8Q96CD0 374 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 CCDC138Q96M89 665 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 SNX25Q9H3E2 840 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 RNF41Q9H4P4 317 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 RABGEF1Q9UJ41 708 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 SOX13Q9UN79 622 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 CORINQ9Y5Q5 1042 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 SQORQ9Y6N5 450 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 A8MU76 341 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 COMTP21964 271 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 GABRB3P28472 473 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 TECP42680 631 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 BTDP43251 543 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 HNRNPFP52597 415 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 CABP4P57796 275 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 TUBA1BP68363 451 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 TUBA1AQ71U36 451 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 ATP6V0D2Q8N8Y2 350 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 GPKOWQ92917 476 aaPredicted RBP eCLIP12.53□□□□□ -0.4
SPIDR-217ENST00000522117 CHST7Q9NS84 486 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 PCDHGA11Q9Y5H2 935 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 SLC30A1Q9Y6M5 507 aa12.53□□□□□ -0.4
SPIDR-217ENST00000522117 NUP188Q5SRE5 1749 aa12.52□□□□□ -0.4
SPIDR-217ENST00000522117 C10orf71Q711Q0 1435 aa12.52□□□□□ -0.4
SPIDR-217ENST00000522117 PRR5-ARHGAP8B1AHC4 643 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 ATE1O95260 518 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 IL1BP01584 269 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CCDC130P13994 396 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 PRKACBP22694 351 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 HOXA7P31268 230 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-217ENST00000522117 SLC16A2P36021 539 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 BMXP51813 675 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 ARHGAP8P85298 464 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CYP2U1Q7Z449 544 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 PQLC1Q8N2U9 271 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 LARP4BQ92615 738 aaKnown RBP12.52□□□□□ -0.41
SPIDR-217ENST00000522117 TANKQ92844 425 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CALML4Q96GE6 196 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CFAP57Q96MR6 1250 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
SPIDR-217ENST00000522117 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 RNF11Q9Y3C5 154 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 GSTTP1A0A1W2PQM5 241 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 STAM2O75886 525 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CALM1P0DP23 149 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CALM2P0DP24 149 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CALM3P0DP25 149 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CD247P20963 164 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 ADCY8P40145 1251 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 EPHB1P54762 984 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 COASYQ13057 564 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 LLGL1Q15334 1064 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 SYDE1Q6ZW31 735 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-217ENST00000522117 EEPD1Q7L9B9 569 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 CLVS1Q8IUQ0 354 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-217ENST00000522117 SLC38A6Q8IZM9 456 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 NDUFAF2Q8N183 169 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 ZNF280CQ8ND82 737 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 THAP11Q96EK4 314 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 MED30Q96HR3 178 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 DCAF5Q96JK2 942 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 ZNF512BQ96KM6 892 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-217ENST00000522117 NUF2Q9BZD4 464 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 HIPK3Q9H422 1215 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 KCNK4Q9NYG8 393 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 POMPQ9Y244 141 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 DNAJC16Q9Y2G8 782 aa12.52□□□□□ -0.41
SPIDR-217ENST00000522117 DDAH1O94760 285 aa12.51□□□□□ -0.41
SPIDR-217ENST00000522117 RPA1P27694 616 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms