RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 CFAP97Q9P2B7 532 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 MYO1AQ9UBC5 1043 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 RBPJLQ9UBG7 517 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRPS1Q9UHF7 1281 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 CDC23Q9UJX2 597 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 MED16Q9Y2X0 877 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 AOX1Q06278 1338 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 ECM29Q5VYK3 1845 aa5.44□□□□□ -1.54
HMGB1P23-201ENST00000518743 IBTKQ9P2D0 1353 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 BPTFQ12830 3046 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 ANKRD36CQ5JPF3 1778 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRIM43BA6NCK2 446 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 LRRC14BA6NHZ5 514 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 PROB1E7EW31 1015 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 IRAK2O43187 625 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 SLC26A4O43511 780 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 NCK2O43639 380 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 HYAL3O43820 417 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 PLA2G6O60733 806 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 INMTO95050 263 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 GNAI2P04899 355 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 JUNP05412 331 aaKnown RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 ANXA2P07355 339 aaKnown RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 IL9P15248 144 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 EEF1GP26641 437 aaKnown RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 GUCY1A2P33402 732 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 ADCY8P40145 1251 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 KIR2DL3P43628 341 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 KCNJ5P48544 419 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 HSPA7P48741 367 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 POLE2P56282 527 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 TEFQ10587 303 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 FOXO1Q12778 655 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 ADAM9Q13443 819 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 DLGAP5Q15398 846 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 KCNMB1Q16558 191 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRIM60Q495X7 471 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 FKBP15Q5T1M5 1219 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF790Q6PG37 636 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 KIF6Q6ZMV9 814 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 CLEC14AQ86T13 490 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 ERO1BQ86YB8 467 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 FAM90A1Q86YD7 464 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 TXLNBQ8N3L3 684 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 LINC00482Q8N8I6 264 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 RNF152Q8N8N0 203 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 PLA2G15Q8NCC3 412 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 NLGN4YQ8NFZ3 816 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 KCNG4Q8TDN1 519 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 SMCR8Q8TEV9 937 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRIM43Q96BQ3 446 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 SLC7A6OSQ96CW6 309 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 NT5C1BQ96P26 610 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 CDC5LQ99459 802 aaKnown RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 STK33Q9BYT3 514 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRIM54Q9BYV2 358 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 DPH1Q9BZG8 443 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 UPF3BQ9BZI7 483 aaKnown RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF518BQ9C0D4 1074 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 MRPL46Q9H2W6 279 aaKnown RBP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 CROTQ9UKG9 612 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 SIK3Q9Y2K2 1263 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 MTCH2Q9Y6C9 303 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 FRMPD3Q5JV73 1810 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 UBN2Q6ZU65 1347 aa5.43□□□□□ -1.54
HMGB1P23-201ENST00000518743 CLCA1A8K7I4 914 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 RFXAPO00287 272 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ITGA10O75578 1167 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 NTSR2O95665 410 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ANXA1P04083 346 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 HNRNPLP14866 589 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ALDH9A1P49189 494 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ARFIP2P53365 341 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ARL4CP56559 192 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 SOX8P57073 446 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 POU6F2P78424 691 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ATP8B2P98198 1209 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 LMOD3Q0VAK6 560 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 TOP3AQ13472 1001 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 MTM1Q13496 603 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 PMS2P11Q13670 270 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 LRP8Q14114 963 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 MPEG1Q2M385 716 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZACNQ401N2 412 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 PABPC1LQ4VXU2 614 aaKnown RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZMAT1Q5H9K5 638 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 EPHA10Q5JZY3 1008 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 JAKMIP3Q5VZ66 844 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 LMBRD2Q68DH5 695 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 KRT40Q6A162 431 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRIM68Q6AZZ1 485 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 MCTP2Q6DN12 878 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRMT10BQ6PF06 316 aaKnown RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 NFXL1Q6ZNB6 911 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 CATSPERGQ6ZRH7 1159 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 FRMD5Q7Z6J6 570 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 SESTD1Q86VW0 696 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms