RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 INHBBP09529 407 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 CNPP09543 421 aaKnown RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 ZSCAN22P10073 491 aaPredicted RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 ARP10275 920 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 HK1P19367 917 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 KCNA3P22001 575 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 SERPINA4P29622 427 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 PPIFP30405 207 aaKnown RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 CDK7P50613 346 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 CCR5P51681 352 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 PGDP52209 483 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 SEC24CP53992 1094 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 NR1H2P55055 460 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 NUCB1Q02818 461 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 TAP2Q03519 686 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 MYO1EQ12965 1108 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 BOP1Q14137 746 aaKnown RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 E2F2Q14209 437 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 SSPNQ14714 243 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 ARTNQ5T4W7 220 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 ATG16L1Q676U5 607 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 CARMIL2Q6F5E8 1435 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 FOXR2Q6PJQ5 311 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 TMEM108Q6UXF1 575 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 NEK10Q6ZWH5 1172 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 BRINP3Q76B58 766 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 ZNF761Q86XN6 746 aaPredicted RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 ZFPM1Q8IX07 1006 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 GPR135Q8IZ08 494 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 C1orf131Q8NDD1 294 aaKnown RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 MBD3L2Q8NHZ7 208 aaPredicted RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 DNAJB14Q8TBM8 379 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 POC1BQ8TC44 478 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 ST8SIA4Q92187 359 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 MARS2Q96GW9 593 aaKnown RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 HIST1H2AAQ96QV6 131 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 LMF1Q96S06 567 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 MPHOSPH9Q99550 1183 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 DPYSL5Q9BPU6 564 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 TREX2Q9BQ50 279 aaPredicted RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 PTDSS2Q9BVG9 487 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 TRIM5Q9C035 493 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 VPS16Q9H269 839 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 RNPEPQ9H4A4 650 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 AGO3Q9H9G7 860 aaKnown RBP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 CHODLQ9H9P2 273 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 SEC61A2Q9H9S3 476 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 USP22Q9UPT9 525 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 KCTD3Q9Y597 815 aa4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6-27P-201ENST00000516146 A6NCN8 305 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 FAM90A18PA6NE21 464 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 FAM90A16PA6NEW6 464 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 FAM90A9PA6NNJ1 464 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 FAM90A5PA8MXJ8 464 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 FFAR3O14843 346 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 RTN3O95197 1032 aaPredicted RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 LARGE1O95461 756 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 HNRNPA1P09651 372 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 FAM90A15PP0C7V4 464 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 FAM90A14PP0C7W9 464 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 MED14OSP0DP75 135 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 KCNA2P16389 499 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 RPS6KB1P23443 525 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 RBL1P28749 1068 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 MTHFSP49914 203 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 TOB1P50616 345 aaPredicted RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 ZNF134P52741 427 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 RBM5P52756 815 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 CASP6P55212 293 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 DCAF7P61962 342 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 CCNIQ14094 377 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 GRM7Q14831 915 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 GRM4Q14833 912 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 ELAVL1Q15717 326 aaKnown RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 SMAD1Q15797 465 aaKnown RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 NBPF8Q3BBV2 869 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 ZIK1Q3SY52 487 aaPredicted RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 PREPLQ4J6C6 727 aaPredicted RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 CTXN3Q4LDR2 81 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 DCAF17Q5H9S7 520 aaPredicted RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 ARHGAP40Q5TG30 622 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 NAA35Q5VZE5 725 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 ARHGEF18Q6ZSZ5 1173 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 RHOT2Q8IXI1 618 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 SLC15A3Q8IY34 581 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 MDGA1Q8NFP4 955 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 HMGB4Q8WW32 186 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 ZUFSPQ96AP4 578 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 TMEM176AQ96HP8 235 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 BARD1Q99728 777 aaKnown RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 NUDT16L1Q9BRJ7 211 aaKnown RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 CHCHD6Q9BRQ6 235 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 PAIP1Q9H074 479 aaKnown RBP4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 CXorf36Q9H7Y0 433 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 ZFP64Q9NPA5 681 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 RNF181Q9P0P0 153 aa4.24□□□□□ -1.73
RNU6-27P-201ENST00000516146 BAG5Q9UL15 447 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms