RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 ABHD11Q8NFV4 315 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 TSR2Q969E8 191 aaKnown RBP5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 RITA1Q96K30 269 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 DPCDQ9BVM2 203 aaPredicted RBP5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 TPCN1Q9ULQ1 816 aa5.7□□□□□ -1.5
UBE2D3-218ENST00000505009 TRIM43BA6NCK2 446 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 H7C4K7 107 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 TSPAN6O43657 245 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 ITGA8P53708 1063 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 SSBP2P81877 361 aaPredicted RBP5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 PSG6Q00889 435 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 GRM3Q14832 879 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 RNASE12Q5GAN4 147 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 YTHDF3Q7Z739 585 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 MYO1HQ8N1T3 1032 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 TERB1Q8NA31 727 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 FAM156AQ8NDB6 213 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 TRIM43Q96BQ3 446 aaPredicted RBP5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 RSPRY1Q96DX4 576 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 SEMA4CQ9C0C4 833 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 BHMT2Q9H2M3 363 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 XPNPEP3Q9NQH7 507 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 DNMT3BQ9UBC3 853 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 LPAR3Q9UBY5 353 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 CDY1Q9Y6F8 540 aa5.69□□□□□ -1.5
UBE2D3-218ENST00000505009 MBD3L4A6NDZ8 208 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 MBD3L3A6NE82 208 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 PYCARD-AS1I3L0S3 204 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 SRGAP2O75044 1071 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 HRGP04196 525 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 ALDH5A1P51649 535 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 GFOD2Q3B7J2 385 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 CERCAMQ5T4B2 595 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 CACHD1Q5VU97 1274 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 RAB11FIP4Q86YS3 637 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 SPARTQ8N0X7 666 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 SPSB4Q96A44 273 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 DAZAP1Q96EP5 407 aaKnown RBP5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 ZBTB45Q96K62 511 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 C5orf34Q96MH7 638 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 PPP1R9BQ96SB3 815 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 C1QTNF7Q9BXJ2 289 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 STK31Q9BXU1 1019 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 CIPCQ9C0C6 399 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 LRRC27Q9C0I9 530 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 COL20A1Q9P218 1284 aa5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 RGS17Q9UGC6 210 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-218ENST00000505009 FER1L4A9Z1Z3 1794 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 ADAMTS3O15072 1205 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 TP73O15350 636 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 CCP110O43303 1012 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 RASAL1O95294 804 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 ZKSCAN1P17029 563 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 RPL17P18621 184 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 SFPQP23246 707 aaKnown RBP eCLIP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 KELP23276 732 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 PRKAR1BP31321 381 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 RENBPP51606 427 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 BCAT1P54687 386 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 RPS16P62249 146 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 FMO1Q01740 532 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 KLF9Q13886 244 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 CCNIQ14094 377 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 CNGA2Q16280 664 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 SLC18B1Q6NT16 456 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 PPP4R4Q6NUP7 873 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 DARS2Q6PI48 645 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 CCDC149Q6ZUS6 474 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 SMG7Q92540 1137 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 NMD3Q96D46 503 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 PDGFCQ9NRA1 345 aa5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 AFF4Q9UHB7 1163 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-218ENST00000505009 PSMD9O00233 223 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 PPP6CO00743 305 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 TPP1O14773 563 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 MGEA5O60502 916 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 RASSF9O75901 435 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 ZBED1O96006 694 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 HGFP14210 728 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 IL1R1P14778 569 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 KLRC1P26715 233 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 UQCRC1P31930 480 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 GKP32189 559 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 FAM193AP78312 1265 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 GALEQ14376 348 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 POLD3Q15054 466 aaPredicted RBP5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 TMEM63BQ5T3F8 832 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 RNF220Q5VTB9 566 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 ZNF425Q6IV72 752 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 SLC2A7Q6PXP3 512 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 CATSPERGQ6ZRH7 1159 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 NEK8Q86SG6 692 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 SESTD1Q86VW0 696 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 SMCR8Q8TEV9 937 aaPredicted RBP5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 SCARB1Q8WTV0 552 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 LRTOMTQ8WZ04 291 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 ASB2Q96Q27 587 aa5.66□□□□□ -1.5
UBE2D3-218ENST00000505009 SNX18Q96RF0 628 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms