RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ABRAQ8N0Z2 381 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 OTUD7AQ8TE49 926 aaPredicted RBP6.33□□□□□ -1.4
SSR3-208ENST00000496050 TMEM171Q8WVE6 324 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 OSCP1Q8WVF1 389 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 RSC1A1Q92681 617 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 MYEOVQ96EZ4 313 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 ZSCAN31Q96LW9 406 aaPredicted RBP6.33□□□□□ -1.4
SSR3-208ENST00000496050 INO80BQ9C086 356 aaPredicted RBP6.33□□□□□ -1.4
SSR3-208ENST00000496050 ITM2CQ9NQX7 267 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 ANAPC4Q9UJX5 808 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 SCAF8Q9UPN6 1271 aaKnown RBP6.33□□□□□ -1.4
SSR3-208ENST00000496050 A0A0G2JLL6 359 aaPredicted RBP6.32□□□□□ -1.4
SSR3-208ENST00000496050 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 OR2W5A6NFC9 320 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 WDHD1O75717 1129 aaPredicted RBP6.32□□□□□ -1.4
SSR3-208ENST00000496050 USP1O94782 785 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 MST1P26927 711 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 MAPK9P45984 424 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 ALDH18A1P54886 795 aaKnown RBP6.32□□□□□ -1.4
SSR3-208ENST00000496050 GPS1Q13098 491 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 CCDC70Q6NSX1 233 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 JMJD6Q6NYC1 403 aaPredicted RBP6.32□□□□□ -1.4
SSR3-208ENST00000496050 FUBP1Q96AE4 644 aaKnown RBP6.32□□□□□ -1.4
SSR3-208ENST00000496050 PTCD3Q96EY7 689 aaKnown RBP6.32□□□□□ -1.4
SSR3-208ENST00000496050 ZBTB45Q96K62 511 aaPredicted RBP6.32□□□□□ -1.4
SSR3-208ENST00000496050 ACTRT3Q9BYD9 372 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 C9orf78Q9NZ63 289 aaPredicted RBP6.32□□□□□ -1.4
SSR3-208ENST00000496050 KIF17Q9P2E2 1029 aa6.32□□□□□ -1.4
SSR3-208ENST00000496050 TMEM200CA6NKL6 621 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 M0R3H8 397 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 IPO5O00410 1097 aaKnown RBP6.31□□□□□ -1.4
SSR3-208ENST00000496050 FCHO1O14526 889 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 PLSCR1O15162 318 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 SRGNP10124 158 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 HGFP14210 728 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 CD19P15391 556 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 VEGFAP15692 232 aaPredicted RBP6.31□□□□□ -1.4
SSR3-208ENST00000496050 ADORA2AP29274 412 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 GUCY1B3Q02153 619 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 ITIH3Q06033 890 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 TIGD6Q17RP2 521 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 TIGD2Q4W5G0 525 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 DEPDC1Q5TB30 811 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 ABLIM2Q6H8Q1 611 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 SULT6B1Q6IMI4 303 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 DTX2Q86UW9 622 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 RAB11FIP4Q86YS3 637 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 IZUMO1Q8IYV9 350 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 B3GALNT2Q8NCR0 500 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 MBD3L2Q8NHZ7 208 aaPredicted RBP6.31□□□□□ -1.4
SSR3-208ENST00000496050 IL17DQ8TAD2 202 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 SLC30A5Q8TAD4 765 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 CXorf38Q8TB03 319 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 STT3BQ8TCJ2 826 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 SLC25A43Q8WUT9 341 aaPredicted RBP6.31□□□□□ -1.4
SSR3-208ENST00000496050 WDR60Q8WVS4 1066 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 EXTL1Q92935 676 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 TBATAQ96M53 351 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 C8orf49Q96NF6 230 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 NUDT22Q9BRQ3 303 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 C17orf80Q9BSJ5 609 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 TP63Q9H3D4 680 aaPredicted RBP6.31□□□□□ -1.4
SSR3-208ENST00000496050 EPS8L2Q9H6S3 715 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 SAYSD1Q9NPB0 183 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 TBCCD1Q9NVR7 557 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 SMPD4Q9NXE4 827 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 HS3ST4Q9Y661 456 aa6.31□□□□□ -1.4
SSR3-208ENST00000496050 PNMA6EA0A0J9YXQ4 647 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 BTBD11A6QL63 1104 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 PPM1DO15297 605 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 DNPH1O43598 174 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 ACTL6BO94805 426 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 ANXA6P08133 673 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 ARP10275 920 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 MTHFSP49914 203 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 NXPH1P58417 271 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 AP2B1P63010 937 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 JAG1P78504 1218 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 TIAL1Q01085 375 aaKnown RBP eCLIP6.3□□□□□ -1.4
SSR3-208ENST00000496050 TAF5Q15542 800 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 USP39Q53GS9 565 aaKnown RBP6.3□□□□□ -1.4
SSR3-208ENST00000496050 ANKRD45Q5TZF3 282 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 CYP26C1Q6V0L0 522 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 MMS22LQ6ZRQ5 1243 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 TTLL10Q6ZVT0 673 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 ATG4AQ8WYN0 398 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 DVL3Q92997 716 aaPredicted RBP6.3□□□□□ -1.4
SSR3-208ENST00000496050 CEP72Q9P209 647 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 DKK2Q9UBU2 259 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 NKX1-2Q9UD57 310 aaPredicted RBP6.3□□□□□ -1.4
SSR3-208ENST00000496050 PGAP2Q9UHJ9 254 aa6.3□□□□□ -1.4
SSR3-208ENST00000496050 PSMD9O00233 223 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 PEX11BO96011 259 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 NTSR1P30989 418 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 TIRAPP58753 221 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 R3HDM1Q15032 1099 aaKnown RBP6.29□□□□□ -1.4
SSR3-208ENST00000496050 TAF12Q16514 161 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 ADCK5Q3MIX3 580 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 NRN1LQ496H8 165 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms