RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ABRAQ8N0Z2 381 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 FSTL5Q8N475 847 aaPredicted RBP4.67□□□□□ -1.66
CLK1-213ENST00000492793 ANKRD42Q8N9B4 389 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 TFAP2BQ92481 460 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 GLG1Q92896 1179 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 PRPF18Q99633 342 aaKnown RBP4.67□□□□□ -1.66
CLK1-213ENST00000492793 C17orf80Q9BSJ5 609 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 OBP2BQ9NPH6 170 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 TM7SF3Q9NS93 570 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 KCTD5Q9NXV2 234 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 TMOD4Q9NZQ9 345 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 DNAJB11Q9UBS4 358 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 SNX14Q9Y5W7 946 aa4.67□□□□□ -1.66
CLK1-213ENST00000492793 POLR2AP24928 1970 aaKnown RBP4.67□□□□□ -1.66
CLK1-213ENST00000492793 A0A087WZ62 844 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 LOC102724159A0A0B4J2E5 919 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 AQP12BA6NM10 295 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 SLC16A3O15427 465 aaKnown RBP4.66□□□□□ -1.66
CLK1-213ENST00000492793 TLR5O60602 858 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 USP1O94782 785 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 ZNF202O95125 648 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 FESP07332 822 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 ADH4P08319 380 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 NR2F6P10588 404 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 PECAM1P16284 738 aaPredicted RBP4.66□□□□□ -1.66
CLK1-213ENST00000492793 GABRB3P28472 473 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 EPHA3P29320 983 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 LIPAP38571 399 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 HALP42357 657 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 PPM1FP49593 454 aaPredicted RBP4.66□□□□□ -1.66
CLK1-213ENST00000492793 GATMP50440 423 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 PUM1Q14671 1186 aaKnown RBP eCLIP4.66□□□□□ -1.66
CLK1-213ENST00000492793 PWP2Q15269 919 aaKnown RBP4.66□□□□□ -1.66
CLK1-213ENST00000492793 TREML2Q5T2D2 321 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 MANEALQ5VSG8 457 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 RAP1GAP2Q684P5 730 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 SLC9A4Q6AI14 798 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 ERAP2Q6P179 960 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 VWA1Q6PCB0 445 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 USP17L6PQ6QN14 398 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 CLEC9AQ6UXN8 241 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 FAM109AQ8N4B1 249 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 LRRC71Q8N4P6 559 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 MYCT1Q8N699 235 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 C11orf44Q8N8P7 122 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 SUPT20HQ8NEM7 779 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 R3HDM4Q96D70 268 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 PGBD1Q96JS3 809 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 PAGR1Q9BTK6 254 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 TRIM5Q9C035 493 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 ZCWPW1Q9H0M4 648 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 ZBTB26Q9HCK0 441 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 LRIT1Q9P2V4 623 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 DKK2Q9UBU2 259 aa4.66□□□□□ -1.66
CLK1-213ENST00000492793 MORC2Q9Y6X9 1032 aaPredicted RBP4.66□□□□□ -1.66
CLK1-213ENST00000492793 A1L4Q6 167 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 GOLGA6L3A6NEY3 463 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 LGALS16A8MUM7 142 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 ZSCAN9O15535 394 aaPredicted RBP4.65□□□□□ -1.67
CLK1-213ENST00000492793 CSTBP04080 98 aaKnown RBP4.65□□□□□ -1.67
CLK1-213ENST00000492793 ERBB2P04626 1255 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 EGR2P11161 476 aaPredicted RBP4.65□□□□□ -1.67
CLK1-213ENST00000492793 EGR1P18146 543 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 UQCRC1P31930 480 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 ZEB1P37275 1124 aaPredicted RBP4.65□□□□□ -1.67
CLK1-213ENST00000492793 AVPR1BP47901 424 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 BCAT1P54687 386 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 PFKFB4Q16877 469 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 P3H1Q32P28 736 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 ZACNQ401N2 412 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 TEDDM1Q5T9Z0 273 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 FNDC7Q5VTL7 733 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 KAZNQ674X7 775 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 MRNIPQ6NTE8 343 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 CAND1Q86VP6 1230 aaKnown RBP4.65□□□□□ -1.67
CLK1-213ENST00000492793 LNX2Q8N448 690 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 ZNF668Q96K58 619 aaPredicted RBP4.65□□□□□ -1.67
CLK1-213ENST00000492793 SCLT1Q96NL6 688 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 INO80BQ9C086 356 aaPredicted RBP4.65□□□□□ -1.67
CLK1-213ENST00000492793 EPS8L2Q9H6S3 715 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 NECTIN3Q9NQS3 549 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 KLC4Q9NSK0 619 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 DACT1Q9NYF0 836 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 EHD3Q9NZN3 535 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 DKK3Q9UBP4 350 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 CAPN11Q9UMQ6 739 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 HS3ST4Q9Y661 456 aa4.65□□□□□ -1.67
CLK1-213ENST00000492793 C1QTNF3-AMACRE9PGA6 284 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 TRIM38O00635 465 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 ORC4O43929 436 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 HKR1P10072 659 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 ZFXP17010 805 aaPredicted RBP4.64□□□□□ -1.67
CLK1-213ENST00000492793 PDIA3P30101 505 aaKnown RBP4.64□□□□□ -1.67
CLK1-213ENST00000492793 MCM7P33993 719 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 FOLR3P41439 243 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 SCAPQ12770 1279 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 SPARCL1Q14515 664 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 MAPKAPK3Q16644 382 aa4.64□□□□□ -1.67
CLK1-213ENST00000492793 TUBB8Q3ZCM7 444 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms