RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 IL6RP08887 468 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 MYL4P12829 197 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 TM4SF4P48230 202 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 ALDH5A1P51649 535 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 PGDP52209 483 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 BCAT1P54687 386 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 SIM1P81133 766 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 BTKQ06187 659 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 PMS2P11Q13670 270 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 NPY5RQ15761 445 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 ZNF750Q32MQ0 723 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 IZUMO3Q5VZ72 239 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 FCRL6Q6DN72 434 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 HIBCHQ6NVY1 386 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 FBXO38Q6PIJ6 1188 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 CAND1Q86VP6 1230 aaKnown RBP5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 RAB11FIP4Q86YS3 637 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 FANCBQ8NB91 859 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 RFKQ969G6 155 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 GJA10Q969M2 543 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 PDLIM2Q96JY6 352 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 HAPLN3Q96S86 360 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 EIF2AQ9BY44 585 aaKnown RBP5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 TRIM5Q9C035 493 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 ARFGAP3Q9NP61 516 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 MYO1AQ9UBC5 1043 aa5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 RGS17Q9UGC6 210 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P38-201ENST00000490557 A0A1W2PPC4 97 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 WDR27A2RRH5 827 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 AREL1O15033 823 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 CD3EAPO15446 510 aaKnown RBP5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 NCK2O43639 380 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 A1BGP04217 495 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 DLDP09622 509 aaKnown RBP5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 HARSP12081 509 aaKnown RBP5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 CYP2C18P33260 490 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 RARRES1P49788 294 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 KCNAB1Q14722 419 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 LY6KQ17RY6 165 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 TSTD2Q5T7W7 516 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 SLC9A4Q6AI14 798 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 OLFML1Q6UWY5 402 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 CATSPERGQ6ZRH7 1159 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 RNF152Q8N8N0 203 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 GPR150Q8NGU9 434 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 BRI3BPQ8WY22 251 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 ZNF566Q969W8 418 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 MPHOSPH6Q99547 160 aaKnown RBP5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 INO80BQ9C086 356 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 CHST12Q9NRB3 414 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 FOXJ2Q9P0K8 574 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 SLC17A6Q9P2U8 582 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 DKK4Q9UBT3 224 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 ZNHIT2Q9UHR6 403 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 HPSEQ9Y251 543 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 INSL6Q9Y581 213 aa5.82□□□□□ -1.48
HMGB1P38-201ENST00000490557 CLCA1A8K7I4 914 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 PRKCBP05771 671 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 HGFP14210 728 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 UQCRC1P31930 480 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 CCT8P50990 548 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 STRIP1Q5VSL9 837 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 WDR53Q7Z5U6 358 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 DEPTORQ8TB45 409 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 SOCS4Q8WXH5 440 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 DNAJB11Q9UBS4 358 aa5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 DRG1Q9Y295 367 aaKnown RBP5.81□□□□□ -1.48
HMGB1P38-201ENST00000490557 KIAA0355O15063 1070 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 FGF18O76093 207 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 VNN1O95497 513 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 NPSP0C0P6 89 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 FAM163BP0C2L3 166 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 TYRP1P17643 537 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 ENGP17813 658 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 PROZP22891 400 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 YY1P25490 414 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 GATMP50440 423 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 COPAP53621 1224 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 EEFSECP57772 596 aaKnown RBP5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 SUMO2P61956 95 aaKnown RBP5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 TBC1D25Q3MII6 688 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 PRR16Q569H4 304 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 ANKRD16Q6P6B7 361 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 USP17L6PQ6QN14 398 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 PARS2Q7L3T8 475 aaKnown RBP5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 KRT28Q7Z3Y7 464 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 ZNF804AQ7Z570 1209 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 MORC1Q86VD1 984 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 VGLL2Q8N8G2 317 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 ZBTB45Q96K62 511 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 SNX27Q96L92 541 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 SGCZQ96LD1 299 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 HIST1H2AAQ96QV6 131 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 VN1R3Q9BXE9 311 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 SLC25A32Q9H2D1 315 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 RIOX1Q9H6W3 641 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 CPNE5Q9HCH3 593 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 GJB4Q9NTQ9 266 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms