RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 RSAD1Q9HA92 442 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 DDIT4Q9NX09 232 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.52
SMPD4-218ENST00000482171 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 FZD9O00144 591 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 C2CD2LO14523 706 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 KRT38O76015 456 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 RECQL4O94761 1208 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 LYPLA2O95372 231 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 AP2B1P63010 937 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 FMO1Q01740 532 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 C3orf62Q6ZUJ4 267 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 RASSF3Q86WH2 238 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 MYLK4Q86YV6 388 aaPredicted RBP11.77□□□□□ -0.52
SMPD4-218ENST00000482171 CRLF3Q8IUI8 442 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 SEPT5Q99719 369 aaPredicted RBP11.77□□□□□ -0.52
SMPD4-218ENST00000482171 SLC38A7Q9NVC3 462 aa11.77□□□□□ -0.52
SMPD4-218ENST00000482171 ITGB4P16144 1822 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 ZNF536O15090 1300 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 BTBD19C9JJ37 291 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 ZCCHC18P0CG32 403 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 MCF2P10911 925 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 PCSK1P29120 753 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 RPS6KA2Q15349 733 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 KLHL38Q2WGJ6 581 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 MFSD7Q6UXD7 560 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 FAM71AQ8IYT1 594 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 ADGRF2Q8IZF7 708 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 IQCKQ8N0W5 287 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 TRIML2Q8N7C3 387 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 EPAS1Q99814 870 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 SH3GL2Q99962 352 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 RNPEPQ9H4A4 650 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 XPNPEP1Q9NQW7 623 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 FANCGO15287 622 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 ENO1P06733 434 aaKnown RBP11.77□□□□□ -0.53
SMPD4-218ENST00000482171 RNF180Q86T96 592 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 MBOAT7Q96N66 472 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 PRKAG2Q9UGJ0 569 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 CRYBG1Q9Y4K1 1723 aa11.77□□□□□ -0.53
SMPD4-218ENST00000482171 CCDC22O60826 627 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 FNTAP49354 379 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 MAP3K7CLP57077 242 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 ASPHQ12797 758 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 OVGP1Q12889 678 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 RCN1Q15293 331 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 FSCN1Q16658 493 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 MGAT5BQ3V5L5 792 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 KRT80Q6KB66 452 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 SLC27A1Q6PCB7 646 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 AFAP1L2Q8N4X5 818 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 LENG1Q96BZ8 264 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 ACO2Q99798 780 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 ROPN1BQ9BZX4 212 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 TTYH3Q9C0H2 523 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 ROPN1Q9HAT0 212 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 PFDN4Q9NQP4 134 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 CHST7Q9NS84 486 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 SAE1Q9UBE0 346 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 ZC3H7BQ9UGR2 993 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 MYH3P11055 1940 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 KBTBD13C9JR72 458 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 EEF2KO00418 725 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 HNRNPCP07910 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 PSEN2P49810 448 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 QPCTQ16769 361 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 TFDP3Q5H9I0 405 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 OR6P1Q8NGX9 317 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 LRGUKQ96M69 825 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 GPR20Q99678 358 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 MARCOQ9UEW3 520 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 IPO11Q9UI26 975 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 PSTPIP1O43586 416 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 THP07101 528 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 EPHB2P29323 1055 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 PAPOLAP51003 745 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 MARSP56192 900 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 PTENP60484 403 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 KCNJ2P63252 427 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 ATG16L1Q676U5 607 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 DENND1BQ6P3S1 775 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 WDR75Q8IWA0 830 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 PABPC5Q96DU9 382 aaKnown RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 GAD1Q99259 594 aa11.76□□□□□ -0.53
SMPD4-218ENST00000482171 BARX2Q9UMQ3 279 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-218ENST00000482171 SNUPNO95149 360 aaKnown RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 APOEP02649 317 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 PMLP29590 882 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 ANKRD20A2Q5SQ80 823 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 ANKRD20A1Q5TYW2 823 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 SPOCD1Q6ZMY3 1216 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 ADAM32Q8TC27 787 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 AGR3Q8TD06 166 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 ASB7Q9H672 318 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 TMEM134Q9H6X4 195 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms