RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 RAB32Q13637 225 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CRYMQ14894 314 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 RAB39AQ14964 217 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ZKSCAN8Q15776 578 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TBCEQ15813 527 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF674Q2M3X9 581 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 WSCD2Q2TBF2 565 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 KHDC1Q4VXA5 237 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 HSP90AA5PQ58FG0 334 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 BMP2KLQ5H9B9 411 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TOR1AIP1Q5JTV8 583 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 DNTTIP2Q5QJE6 756 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CPZQ66K79 652 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ANO7Q6IWH7 933 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 KIAA1841Q6NSI8 718 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 WDR73Q6P4I2 378 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 OLFM4Q6UX06 510 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 FAM83HQ6ZRV2 1179 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 UNC13DQ70J99 1090 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 IKBIPQ70UQ0 350 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CEP68Q76N32 757 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 KRT28Q7Z3Y7 464 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 PPP1R42Q7Z4L9 355 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 RSPH3Q86UC2 560 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 RAB11FIP4Q86YS3 637 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 WDR63Q8IWG1 891 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 RHOT1Q8IXI2 618 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 YAF2Q8IY57 180 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 AGGF1Q8N302 714 aaeCLIP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 DPP10Q8N608 796 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 DAGLBQ8NCG7 672 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 GLB1L3Q8NCI6 653 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MNS1Q8NEH6 495 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 NFKBIDQ8NI38 313 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SETD6Q8TBK2 473 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 NOC3LQ8WTT2 800 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 STON2Q8WXE9 905 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 KRT35Q92764 455 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 DPF2Q92785 391 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ARHGEF2Q92974 986 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 PTP4A1Q93096 173 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 KLHDC7BQ96G42 594 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ABHD17AQ96GS6 310 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF764Q96H86 408 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CABS1Q96KC9 395 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MRGPRX1Q96LB2 322 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MIPEPQ99797 713 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SPXQ9BT56 116 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 POLR3CQ9BUI4 534 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CARD10Q9BWT7 1032 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SLC12A9Q9BXP2 914 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TEX12Q9BXU0 123 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 FUT8Q9BYC5 575 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TRIM54Q9BYV2 358 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 DPH1Q9BZG8 443 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ZCWPW1Q9H0M4 648 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TP63Q9H3D4 680 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MUC13Q9H3R2 512 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SEMA4AQ9H3S1 761 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 EPB41L1Q9H4G0 881 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 TASP1Q9H6P5 420 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MANSC1Q9H8J5 431 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 VEZTQ9HBM0 779 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 SLC6A20Q9NP91 592 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MID1IP1Q9NPA3 183 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 A1CFQ9NQ94 594 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ARHGEF3Q9NR81 526 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 PPP1R14DQ9NXH3 145 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MCM9Q9NXL9 1143 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 STK32BQ9NY57 414 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CWC15Q9P013 229 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MRPL15Q9P015 296 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CACNG4Q9UBN1 327 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 ZC3H7BQ9UGR2 993 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 CNOT7Q9UIV1 285 aaKnown RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 HPCAL4Q9UM19 191 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 COA3Q9Y2R0 106 aaPredicted RBP3.1□□□□□ -1.91
HMGN4-202ENST00000477243 HS3ST4Q9Y661 456 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 AP1M2Q9Y6Q5 423 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 PIAS3Q9Y6X2 628 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 FAM169AQ9Y6X4 670 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MYPNQ86TC9 1320 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 LAMA3Q16787 3333 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 COL24A1Q17RW2 1714 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 MIA2Q96PC5 1412 aa3.1□□□□□ -1.91
HMGN4-202ENST00000477243 THSD7BQ9C0I4 1608 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 ZFHX3Q15911 3703 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 TNRC6CQ9HCJ0 1690 aaKnown RBP3.09□□□□□ -1.91
HMGN4-202ENST00000477243 A0A0U1RQK1 487 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF320A2RRD8 509 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 KRBA1A5PL33 1030 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 ERICH4A6NGS2 130 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 CCDC169A6NNP5 214 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 ADARB2-AS1A8MUL3 147 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 EFCAB8A8MWE9 144 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 TMEM232C9JQI7 657 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 E7EVH7 732 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 H0YGN5 161 aa3.09□□□□□ -1.91
HMGN4-202ENST00000477243 IGF2BP3O00425 579 aaKnown RBP eCLIP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms