RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 PCYOX1Q9UHG3 505 aa11.94□□□□□ -0.5
U2AF1-209ENST00000475639 BARX2Q9UMQ3 279 aaPredicted RBP11.94□□□□□ -0.5
U2AF1-209ENST00000475639 STON1Q9Y6Q2 735 aa11.94□□□□□ -0.5
U2AF1-209ENST00000475639 IGSF9BQ9UPX0 1349 aa11.94□□□□□ -0.5
U2AF1-209ENST00000475639 ATXN3P54252 364 aaPredicted RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 BFSP2Q13515 415 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 LRRC36Q1X8D7 754 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 ADCK2Q7Z695 626 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 AGR3Q8TD06 166 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 CYGBQ8WWM9 190 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 UNC45AQ9H3U1 944 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 LATS2Q9NRM7 1088 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 NDUFA13Q9P0J0 144 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 PCDHA6Q9UN73 950 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 SMG5Q9UPR3 1016 aaKnown RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 PCDHA8Q9Y5H6 950 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 PVALEFA0A1B0GWK0 134 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 HSD17B4P51659 736 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 GALCP54803 685 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 CTSWP56202 376 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 SETD3Q86TU7 594 aaPredicted RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 MTDHQ86UE4 582 aaKnown RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 SATL1Q86VE3 508 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 RHOT1Q8IXI2 618 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 FLCNQ8NFG4 579 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 SLC35G2Q8TBE7 412 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 BTBD10Q9BSF8 475 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 IL1RAPL1Q9NZN1 696 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 SH3GLB1Q9Y371 365 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 SNTNA6NMZ2 147 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 MAGEB3O15480 346 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 ALBP02768 609 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 UCHL3P15374 230 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 PEX3P56589 373 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 TNFAIP2Q03169 654 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 PPATQ06203 517 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 R3HDM1Q15032 1099 aaKnown RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 CCDC137Q6PK04 289 aaKnown RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 POTEEQ6S8J3 1075 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 ZNF554Q86TJ5 538 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 FOXP3Q9BZS1 431 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 PDE5AO76074 875 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 ASMTLO95671 621 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 CCND2P30279 289 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 GUCA1AP43080 201 aaPredicted RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 ARL4DP49703 201 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 VPS50Q96JG6 964 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 INIPQ9NRY2 104 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 MBD2Q9UBB5 411 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 GRID1Q9ULK0 1009 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 WNK3Q9BYP7 1800 aa11.93□□□□□ -0.5
U2AF1-209ENST00000475639 PHRF1Q9P1Y6 1649 aaKnown RBP11.93□□□□□ -0.5
U2AF1-209ENST00000475639 RNF103O00237 685 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 NMT2O60551 498 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 CSF1RP07333 972 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 DSG1Q02413 1049 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 NCCRP1Q6ZVX7 275 aaPredicted RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 SAR1AQ9NR31 198 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 AP4S1Q9Y587 144 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 COL22A1Q8NFW1 1626 aaPredicted RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 DOCK2Q92608 1830 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 ATP9BO43861 1147 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 EDF1O60869 148 aaKnown RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 CDH16O75309 829 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 KLHL2O95198 593 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 DLGAP3O95886 979 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 SERPIND1P05546 499 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 CYP11B2P19099 503 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 PRKCIP41743 596 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 SNAP25P60880 206 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 RBBP7Q16576 425 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 ZNF699Q32M78 642 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 SPIRE2Q8WWL2 714 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 TMA16Q96EY4 203 aaKnown RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 CATSPER2Q96P56 530 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 RBBP8Q99708 897 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 ECSITQ9BQ95 431 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 CORO1BQ9BR76 489 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 OXCT2Q9BYC2 517 aaPredicted RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 GLI3P10071 1580 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 CYP2D7A0A087X1C5 515 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 S100A9P06702 114 aaKnown RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 AMPD1P23109 780 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 CHKAP35790 457 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 STX3Q13277 289 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 CTTNQ14247 550 aaKnown RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 PLEKHG4Q58EX7 1191 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 SLC45A4Q5BKX6 768 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 TMEM270Q6UE05 265 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 ASZ1Q8WWH4 475 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 FAM167AQ96KS9 214 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 AJAP1Q9UKB5 411 aaPredicted RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 SPATA2Q9UM82 520 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 DUOX1Q9NRD9 1551 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 TBXAS1P24557 533 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms