RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 PGM2Q96G03 612 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 TCTN2Q96GX1 697 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 SCLT1Q96NL6 688 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 SPAG5Q96R06 1193 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 MED15Q96RN5 788 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 TTYH3Q9C0H2 523 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 IRF2BPLQ9H1B7 796 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 NOL6Q9H6R4 1146 aaKnown RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 PIH1D3Q9NQM4 214 aaKnown RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 AIPL1Q9NZN9 384 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 VPS54Q9P1Q0 977 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 CPSF2Q9P2I0 782 aaKnown RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 SUCLA2Q9P2R7 463 aaPredicted RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 PI4KBQ9UBF8 816 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 ARPP21Q9UBL0 812 aaPredicted RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 CGGBP1Q9UFW8 167 aaPredicted RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 SEC63Q9UGP8 760 aaKnown RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 DUSP13Q9UII6 198 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 FBXL5Q9UKA1 691 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 MTUS1Q9ULD2 1270 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 ZBTB21Q9ULJ3 1066 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 NFU1Q9UMS0 254 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 PLAAQ9Y263 795 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 SLC5A6Q9Y289 635 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 SF3B6Q9Y3B4 125 aaKnown RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 EMC9Q9Y3B6 208 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 NOC2LQ9Y3T9 749 aaKnown RBP5.22□□□□□ -1.57
LRCH3-214ENST00000473177 PHIPQ8WWQ0 1821 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 PIEZO1Q92508 2521 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 GRIN2DO15399 1336 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 KDM3AQ9Y4C1 1321 aa5.22□□□□□ -1.57
LRCH3-214ENST00000473177 RLFQ13129 1914 aa5.21□□□□□ -1.57
LRCH3-214ENST00000473177 EPOPA6NHQ4 379 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ZNF233A6NK53 670 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 STXBP3O00186 592 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ARVCFO00192 962 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 AGRPO00253 132 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 KRIT1O00522 736 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 NOP56O00567 594 aaKnown RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 CETN3O15182 167 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 MARCH6O60337 910 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 HIP1RO75146 1068 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ADAMTS4O75173 837 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 KRT37O76014 449 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 MOCS3O95396 460 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ESR1P03372 595 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 LDHCP07864 332 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ACTN1P12814 892 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 VCAM1P19320 739 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 RXRAP19793 462 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 FGFR2P21802 821 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 SKIV2L2P42285 1042 aaKnown RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 RHBDL3P58872 404 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 CAV1Q03135 178 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 RNASELQ05823 741 aaKnown RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 KLHL30Q0D2K2 578 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 TROAPQ12815 778 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 BNIP3Q12983 259 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 NAA25Q14CX7 972 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 PKN1Q16512 942 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 TDRD12Q587J7 1177 aaKnown RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 TTMPQ5BVD1 217 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ANKRD20A8PQ5CZ79 823 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 DENND2CQ68D51 928 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ANKRD40Q6AI12 368 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 LBX2Q6XYB7 198 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 RNF111Q6ZNA4 994 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 CATSPERGQ6ZRH7 1159 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 STXBP4Q6ZWJ1 553 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 SPATC1Q76KD6 591 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 APBB1IPQ7Z5R6 666 aaPredicted RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ZNF227Q86WZ6 799 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 RAB11FIP4Q86YS3 637 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 IRF2BP1Q8IU81 584 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 WFDC3Q8IUB2 231 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 FAM126BQ8IXS8 530 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 MYOCDQ8IZQ8 938 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 UBL4BQ8N7F7 174 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 BBOF1Q8ND07 529 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 SHCBP1Q8NEM2 672 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 GDPD5Q8WTR4 605 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 UBLCP1Q8WVY7 318 aaPredicted RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 TBC1D5Q92609 795 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ATOH1Q92858 354 aaPredicted RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 TBC1D31Q96DN5 1066 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 MRGPRX3Q96LB0 322 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 C12orf42Q96LP6 360 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 KRT12Q99456 494 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 TMEM109Q9BVC6 243 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 TRIM9Q9C026 710 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 SPATC1LQ9H0A9 340 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 BLZF1Q9H2G9 400 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 DHX36Q9H2U1 1008 aaKnown RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 VCXQ9H320 206 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 MROH8Q9H579 483 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 CCDC134Q9H6E4 229 aa5.21□□□□□ -1.58
LRCH3-214ENST00000473177 RPAP3Q9H6T3 665 aaPredicted RBP5.21□□□□□ -1.58
LRCH3-214ENST00000473177 ARMT1Q9H993 441 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms