RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SYT13Q7L8C5 426 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 FILIP1Q7Z7B0 1213 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 NUP93Q8N1F7 819 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 GOLGA5Q8TBA6 731 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 NETO1Q8TDF5 533 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 CHAMP1Q96JM3 812 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 MED10Q9BTT4 135 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 ELOVL4Q9GZR5 314 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 SMYD3Q9H7B4 428 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 DMAC2Q9NW81 257 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 DNAH14Q0VDD8 3507 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 OTOGLQ3ZCN5 2332 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 F5P12259 2224 aa14.13□□□□□ -0.15
CPSF4-210ENST00000469897 A0A1B0GVL5 298 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 K7EQS6 105 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 SLC30A4O14863 429 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 DCLK1O15075 740 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 VNN1O95497 513 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 YWHAQP27348 245 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 OPRD1P41143 372 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 CLDN10P78369 228 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 NCOA4Q13772 614 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 SF3A2Q15428 464 aaKnown RBP14.12□□□□□ -0.15
CPSF4-210ENST00000469897 ZNF699Q32M78 642 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 C2orf27AQ580R0 203 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 ZNF667Q5HYK9 610 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 RHBDF2Q6PJF5 856 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 KIAA0895Q8NCT3 520 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 LOXL4Q96JB6 756 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 SLITRK1Q96PX8 696 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 SDCBP2Q9H190 292 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 EXOC1Q9NV70 894 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 CFAP97Q9P2B7 532 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 INVSQ9Y283 1065 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 TSC2P49815 1807 aa14.12□□□□□ -0.15
CPSF4-210ENST00000469897 OLFM2O95897 454 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 OAS1P00973 400 aaKnown RBP14.11□□□□□ -0.15
CPSF4-210ENST00000469897 MBL2P11226 248 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-210ENST00000469897 CMA1P23946 247 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 DGKEP52429 567 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 AP3M2P53677 418 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 DHCR24Q15392 516 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 SGSM1Q2NKQ1 1148 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 GAB4Q2WGN9 574 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 SCARA5Q6ZMJ2 495 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 ACOT1Q86TX2 421 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 SCAMP5Q8TAC9 235 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 ZC3H10Q96K80 434 aaKnown RBP14.11□□□□□ -0.15
CPSF4-210ENST00000469897 DUSP15Q9H1R2 295 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-210ENST00000469897 KCTD10Q9H3F6 313 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 SMOC1Q9H4F8 434 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 VRTNQ9H8Y1 702 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 RXFP3Q9NSD7 469 aa14.11□□□□□ -0.15
CPSF4-210ENST00000469897 ANK1P16157 1881 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 PDXKO00764 312 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 TNFRSF10BO14763 440 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 FOXD2O60548 495 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-210ENST00000469897 AKAP3O75969 853 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 RTN3O95197 1032 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-210ENST00000469897 APBB3O95704 486 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 NR3C1P04150 777 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 CYP17A1P05093 508 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 ZNF806P0C7X5 589 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 PFKFB1P16118 471 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 ORC1Q13415 861 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 PLK5Q496M5 336 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 AASDHQ4L235 1098 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-210ENST00000469897 CEP135Q66GS9 1140 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 FAM35AQ86V20 835 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 SLC9A9Q8IVB4 645 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 CCDC33Q8N5R6 958 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 C12orf50Q8NA57 414 aaPredicted RBP14.1□□□□□ -0.15
CPSF4-210ENST00000469897 FBXO32Q969P5 355 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 ACDQ96AP0 544 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 TNIP3Q96KP6 325 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.1□□□□□ -0.15
CPSF4-210ENST00000469897 EBF1Q9UH73 591 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 DMXL1Q9Y485 3027 aa14.1□□□□□ -0.15
CPSF4-210ENST00000469897 FANCMQ8IYD8 2048 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 SLC9A3R1O14745 358 aaPredicted RBP14.09□□□□□ -0.15
CPSF4-210ENST00000469897 COCHO43405 550 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 AP1G2O75843 785 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 BEST1O76090 585 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 EPN2O95208 641 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 RPN1P04843 607 aaKnown RBP14.09□□□□□ -0.15
CPSF4-210ENST00000469897 NDST1P52848 882 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 MESP2Q0VG99 397 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 PPM1JQ5JR12 505 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 HECTD3Q5T447 861 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 EMC10Q5UCC4 262 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 SPOPLQ6IQ16 392 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 SV2AQ7L0J3 742 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 SFTPA1Q8IWL2 248 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 FUKQ8N0W3 1084 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 PDZD8Q8NEN9 1154 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 TSTD1Q8NFU3 115 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 CCDC26Q8TAB7 109 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 TMEM174Q8WUU8 243 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms