RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ATP5OP48047 213 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 PHEXP78562 749 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 BBS9Q3SYG4 887 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 CTAGE3PQ8IX95 158 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 KCTD6Q8NC69 237 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 GPRC5AQ8NFJ5 357 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 CEP295NLQ96MC4 621 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 CENPKQ9BS16 269 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 TUT1Q9H6E5 874 aaKnown RBP12.87□□□□□ -0.35
USP11-206ENST00000469080 PDP2Q9P2J9 529 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 HMGXB4Q9UGU5 601 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 TMED5Q9Y3A6 229 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 TOM1L1O75674 476 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 FDX1P10109 184 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 CCR3P51677 355 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 SNAPC2Q13487 334 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 TFDP1Q14186 410 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 SLC2A7Q6PXP3 512 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 CCDC89Q8N998 374 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 SAYSD1Q9NPB0 183 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 SNTG2Q9NY99 539 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 LRCH1Q9Y2L9 728 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 NR2E3Q9Y5X4 410 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 MYO18AQ92614 2054 aaKnown RBP12.87□□□□□ -0.35
USP11-206ENST00000469080 LACTBL1A8MY62 500 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 PLA2G6O60733 806 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 VNN1O95497 513 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 ASLP04424 464 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 C6orf222P0C671 652 aaPredicted RBP12.87□□□□□ -0.35
USP11-206ENST00000469080 GNAZP19086 355 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 STIP1P31948 543 aaKnown RBP12.87□□□□□ -0.35
USP11-206ENST00000469080 NEK2P51955 445 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 LSAMPQ13449 338 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 KIF22Q14807 665 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 TWF2Q6IBS0 349 aaKnown RBP12.87□□□□□ -0.35
USP11-206ENST00000469080 JADE1Q6IE81 842 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 NIPA1Q7RTP0 329 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 SPATA24Q86W54 205 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 SCFD2Q8WU76 684 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 OSBPL8Q9BZF1 889 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 ISCUQ9H1K1 167 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 MYH9P35579 1960 aaKnown RBP12.87□□□□□ -0.35
USP11-206ENST00000469080 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
USP11-206ENST00000469080 DOCK5Q9H7D0 1870 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 UNCXA6NJT0 531 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 DDX3YO15523 660 aaKnown RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 TPBGLP0DKB5 382 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 PRLRP16471 622 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 ACAT1P24752 427 aaKnown RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 ITGA8P53708 1063 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 IRX4P78413 519 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 CLEC16AQ2KHT3 1053 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 B3GNT9Q6UX72 402 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 TRIM67Q6ZTA4 783 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 TMEM35BQ8NCS4 154 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 LRRC8CQ8TDW0 803 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 NDRG1Q92597 394 aaKnown RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 CEP41Q9BYV8 373 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 FAM129AQ9BZQ8 928 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 SMARCAD1Q9H4L7 1026 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 INTS9Q9NV88 658 aaKnown RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 NMRK1Q9NWW6 199 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 CIDEBQ9UHD4 219 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 H0YCG3 227 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 GPR25O00155 361 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 OGTO15294 1046 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 TJP3O95049 919 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 KRT3P12035 628 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 COILP38432 576 aaPredicted RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 CCNA1P78396 465 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 ZNF844Q08AG5 666 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 ZACNQ401N2 412 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 KCTD21Q4G0X4 260 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 DENND1BQ6P3S1 775 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 CASC4Q6P4E1 433 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 RSAD2Q8WXG1 361 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 IFT43Q96FT9 208 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 HES6Q96HZ4 224 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 SGIP1Q9BQI5 828 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 TUBA8Q9NY65 449 aaPredicted RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 ARHGAP28Q9P2N2 729 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 NOCTQ9UK39 431 aaKnown RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 COMMD3-BMI1R4GMX3 469 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 E2F8A0AVK6 867 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 ERFP50548 548 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 KRT81Q14533 505 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 TAF5Q15542 800 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
USP11-206ENST00000469080 MFSD7Q6UXD7 560 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 RIOX2Q8IUF8 465 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 MORC4Q8TE76 937 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 DNAJB3Q8WWF6 145 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 TFAP2BQ92481 460 aa12.86□□□□□ -0.35
USP11-206ENST00000469080 GPR20Q99678 358 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms