RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 NKD1Q969G9 470 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 JAKMIP2Q96AA8 810 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 BICD1Q96G01 975 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 DEFB118Q96PH6 123 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 TCHPQ9BT92 498 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 MSTO1Q9BUK6 570 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 NAA15Q9BXJ9 866 aaKnown RBP5.91□□□□□ -1.46
VPS41-211ENST00000466017 SENP6Q9GZR1 1112 aaPredicted RBP5.91□□□□□ -1.46
VPS41-211ENST00000466017 TMEM117Q9H0C3 514 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 CDT1Q9H211 546 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 IKZF4Q9H2S9 585 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 FAM124BQ9H5Z6 455 aaPredicted RBP5.91□□□□□ -1.46
VPS41-211ENST00000466017 RC3H2Q9HBD1 1191 aaKnown RBP5.91□□□□□ -1.46
VPS41-211ENST00000466017 KCND1Q9NSA2 647 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 AIPL1Q9NZN9 384 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 CDY2AQ9Y6F7 541 aa5.91□□□□□ -1.46
VPS41-211ENST00000466017 TTC26A0AVF1 554 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 FAM86C2PA6NEL3 165 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 LRRIQ3A6PVS8 624 aaPredicted RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 TISP43B9A030 160 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 NRDCO43847 1150 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 NOL4O94818 638 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 GYPCP04921 128 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 STAG3L1P0CL83 205 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 HSPA1AP0DMV8 641 aaKnown RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 HSPA1BP0DMV9 641 aaKnown RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 ACRP10323 421 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 PON1P27169 355 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 KRT9P35527 623 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 CLCN7P51798 805 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 LBX1P52954 281 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 ERVFC1P60507 584 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 FAM189BP81408 668 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 PPP3CAQ08209 521 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 BFSP2Q13515 415 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 ZBTB6Q15916 424 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 KIZQ2M2Z5 673 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 SLC10A6Q3KNW5 377 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 ZNF568Q3ZCX4 644 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 EPC2Q52LR7 807 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 FBXO47Q5MNV8 452 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 KLHDC7AQ5VTJ3 777 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 EEF1DP3Q658K8 133 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 SLC27A1Q6PCB7 646 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 SLC39A5Q6ZMH5 540 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 ENOSF1Q7L5Y1 443 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 CATSPER4Q7RTX7 472 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 FAM228AQ86W67 206 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 TMEM192Q8IY95 271 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 TC2NQ8N9U0 490 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 NEK11Q8NG66 645 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 U2AF1L4Q8WU68 220 aaKnown RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 CACTINQ8WUQ7 758 aaKnown RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 ASB11Q8WXH4 323 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 RSPH1Q8WYR4 309 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 DHX38Q92620 1227 aaKnown RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 RNF34Q969K3 372 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 ZBTB10Q96DT7 871 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 TRIM44Q96DX7 344 aaPredicted RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 EEF2KMTQ96G04 330 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 CCDC74BQ96LY2 380 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 ACAP3Q96P50 834 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 FNBP1Q96RU3 617 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 CGRRF1Q99675 332 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 FAM213AQ9BRX8 229 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 CCDC94Q9BW85 323 aaPredicted RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 STK33Q9BYT3 514 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 FAM49AQ9H0Q0 323 aaPredicted RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 GANQ9H2C0 597 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 PDZD7Q9H5P4 517 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 MMRN2Q9H8L6 949 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 RPF1Q9H9Y2 349 aaKnown RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 ERVK-5Q9HDB9 667 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 SIX2Q9NPC8 291 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 RAB20Q9NX57 234 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 CEP72Q9P209 647 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 EBF1Q9UH73 591 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 LUC7L2Q9Y383 392 aaKnown RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 NOC2LQ9Y3T9 749 aaKnown RBP5.9□□□□□ -1.46
VPS41-211ENST00000466017 C2CD2Q9Y426 696 aa5.9□□□□□ -1.46
VPS41-211ENST00000466017 A0A0U1RQF3 1178 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 SSU72P8A0A1W2PR75 194 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 GOLGA8IPA6NC78 632 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 GOLGA8JA6NMD2 632 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 RGS13O14921 159 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 INPPL1O15357 1258 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 B4GALT5O43286 388 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 MFAP3LO75121 409 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 RPS6KA5O75582 802 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 GFPT2O94808 682 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 TFRCP02786 760 aaKnown RBP5.89□□□□□ -1.47
VPS41-211ENST00000466017 PTMAP06454 111 aaKnown RBP5.89□□□□□ -1.47
VPS41-211ENST00000466017 CCDC172P0C7W6 258 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 CKBP12277 381 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 UCHL3P15374 230 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 KCNE1P15382 129 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 TRIM21P19474 475 aaKnown RBP5.89□□□□□ -1.47
VPS41-211ENST00000466017 SLC9A1P19634 815 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 CYP3A5P20815 502 aa5.89□□□□□ -1.47
VPS41-211ENST00000466017 PAX3P23760 479 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms