RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 A1BGP04217 495 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 HNRNPCP07910 306 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 UQCRC1P31930 480 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 CPT1AP50416 773 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 BCAT1P54687 386 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 CYP4F2P78329 520 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 SLC29A2Q14542 456 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 INSCQ1MX18 579 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 HSP90AB2PQ58FF8 381 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 PLAC9Q5JTB6 97 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 CERCAMQ5T4B2 595 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 RRAGBQ5VZM2 374 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 PLAG1Q6DJT9 500 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 Q6ZWC4 215 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 CCAR1Q8IX12 1150 aaKnown RBP5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 SPARTQ8N0X7 666 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 LRRC71Q8N4P6 559 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZNF764Q96H86 408 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 PRR25Q96S07 402 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 STRBPQ96SI9 672 aaKnown RBP5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 FSD1LQ9BXM9 530 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 DHX36Q9H2U1 1008 aaKnown RBP5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 ARNT2Q9HBZ2 717 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 TBC1D23Q9NUY8 699 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 AOX1Q06278 1338 aa5.42□□□□□ -1.54
HMGB1P49-201ENST00000418882 GCOM1H8Y6P7 765 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 PIAS2O75928 621 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 IL18RAPO95256 599 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 PDE8BO95263 885 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 PARP1P09874 1014 aaKnown RBP5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 NDUFB7P17568 137 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 GPD1P21695 349 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 FPR3P25089 353 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 IL1R2P27930 398 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 NTSR1P30989 418 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 ALDH9A1P49189 494 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 PDE1AP54750 535 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 EEFSECP57772 596 aaKnown RBP5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 TIAL1Q01085 375 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 E2F1Q01094 437 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 SATB1Q01826 763 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 TFF2Q03403 129 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 CCNIQ14094 377 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 PARD3BQ8TEW8 1205 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZNF384Q8TF68 577 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 WDYHV1Q96HA8 205 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 TRMT13Q9NUP7 481 aaKnown RBP5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 LPAR3Q9UBY5 353 aa5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 DRG1Q9Y295 367 aaKnown RBP5.41□□□□□ -1.54
HMGB1P49-201ENST00000418882 WIPF3A6NGB9 483 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 AP4M1O00189 453 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 NCK2O43639 380 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 PRC1O43663 620 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 RGS10O43665 173 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 TJP3O95049 919 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 ONECUT2O95948 504 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 ANXA2P07355 339 aaKnown RBP5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 RPL17P18621 184 aaKnown RBP5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 PSG6Q00889 435 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 STK3Q13188 491 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 FHL3Q13643 280 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 IL31Q6EBC2 164 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 ANKRD16Q6P6B7 361 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 NAPRTQ6XQN6 538 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZNF788Q6ZQV5 615 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 METTL25Q8N6Q8 603 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 THAP7Q9BT49 309 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 PNPLA8Q9NP80 782 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 CHST12Q9NRB3 414 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 GEMIN8Q9NWZ8 242 aaKnown RBP5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 FNIP2Q9P278 1114 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 ZNF212Q9UDV6 495 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 VPS51Q9UID3 782 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 RIMKLBQ9ULI2 386 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 CAPN11Q9UMQ6 739 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 ADAMTS5Q9UNA0 930 aa5.4□□□□□ -1.54
HMGB1P49-201ENST00000418882 RBMXL2O75526 392 aaKnown RBP5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 FAM163BP0C2L3 166 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 TPH1P17752 444 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 TM4SF4P48230 202 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 NEK3P51956 506 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 ELLP55199 621 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 TPTEP56180 551 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 TIRAPP58753 221 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 NHLH1Q02575 133 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 RNASE12Q5GAN4 147 aaKnown RBP5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 AARS2Q5JTZ9 985 aaKnown RBP5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 PCID2Q5JVF3 399 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 MANEALQ5VSG8 457 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 PARS2Q7L3T8 475 aaKnown RBP5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 WDR53Q7Z5U6 358 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 YAF2Q8IY57 180 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 VGLL2Q8N8G2 317 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 ATP11CQ8NB49 1132 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 RP9Q8TA86 221 aaKnown RBP5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 DPF1Q92782 380 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 CTHRC1Q96CG8 243 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 SELENOOQ9BVL4 669 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 VN1R3Q9BXE9 311 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 PADI4Q9UM07 663 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms