RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TCRBV7S3A2A0A539 114 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 SCAMP3O14828 347 aaKnown RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 MOCS2O96007 188 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 ATP2A2P16615 1042 aaKnown RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 EPHB2P29323 1055 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 PGGT1BP53609 377 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 PSMD6Q15008 389 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 WLSQ5T9L3 541 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 ZCCHC23Q6ZST2 131 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 TRABD2AQ86V40 505 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 RCOR2Q8IZ40 523 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 SAMD3Q8N6K7 520 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 USP6NLQ92738 828 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 TSR3Q9UJK0 312 aaKnown RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 SYNPO2Q9UMS6 1093 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 CLDN5O00501 218 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 BCAR1P56945 870 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 TGFB2P61812 414 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 DTX3LQ8TDB6 740 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 RAB3IPQ96QF0 476 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 PCYT2Q99447 389 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 CDT1Q9H211 546 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 ZFP69BQ9UJL9 534 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 SNCAIPQ9Y6H5 919 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 TBC1D12O60347 775 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 TOP3BO95985 862 aaKnown RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 CYP1A1P04798 512 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 MIPP30301 263 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 CA8P35219 290 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 AP1B1Q10567 949 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 KLF1Q13351 362 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 OLIG2Q13516 323 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 TMEM132DQ14C87 1099 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 TCEAL1Q15170 157 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 TAF1BQ53T94 588 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 MTDHQ86UE4 582 aaKnown RBP13.97□□□□□ -0.17
COL6A2-204ENST00000409416 ZNF677Q86XU0 584 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 PPP1R12CQ9BZL4 782 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 ARHGAP28Q9P2N2 729 aa13.97□□□□□ -0.17
COL6A2-204ENST00000409416 CCL15-CCL14A0A0B4J2E2 113 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 MT-ND3P03897 115 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 IL1R2P27930 398 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 ADORA2AP29274 412 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 RAD23BP54727 409 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 CCL15Q16663 113 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 ARMCX2Q7L311 632 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 PDIK1LQ8N165 341 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 FBXL18Q96ME1 805 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 FAM111AQ96PZ2 611 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 TSPAN16Q9UKR8 245 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 ENO4A6NNW6 628 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 TRIM72Q6ZMU5 477 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 DNAJB3Q8WWF6 145 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 NUDCD1Q96RS6 583 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 CYTH2Q99418 400 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 USH1CQ9Y6N9 552 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 CEP290O15078 2479 aa13.96□□□□□ -0.17
COL6A2-204ENST00000409416 A0A0B4J269 797 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 ATP9BO43861 1147 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 IQCF3P0C7M6 154 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 SRGAP2BP0DMP2 458 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 ACO1P21399 889 aaKnown RBP13.96□□□□□ -0.18
COL6A2-204ENST00000409416 DCAF6Q58WW2 860 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 METTL7BQ6UX53 244 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 OR6J1Q8NGC5 347 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 ACAP3Q96P50 834 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 ARMCX1Q9P291 453 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 GRID1Q9ULK0 1009 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 CHKBQ9Y259 395 aa13.96□□□□□ -0.18
COL6A2-204ENST00000409416 EVPLQ92817 2033 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 A6NJR5 290 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 H0YCG3 227 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 H3BRB1 525 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 KCNK1O00180 336 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 ZC3H11AO75152 810 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 UNC5CO95185 931 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TROVE2P10155 538 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TBXAS1P24557 533 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 SOX11P35716 441 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TNFAIP8L3Q5GJ75 292 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TFDP3Q5H9I0 405 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 EDEM1Q92611 657 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 SLCO2A1Q92959 643 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TUT1Q9H6E5 874 aaKnown RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PSMC3IPQ9P2W1 217 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PACSIN3Q9UKS6 424 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PLA2G6O60733 806 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 MICAL2O94851 1124 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 OAS1P00973 400 aaKnown RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 ERBB2P04626 1255 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 CCND1P24385 295 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 KLRC2P26717 231 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 VCPP55072 806 aaKnown RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 ARL4CP56559 192 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 ZNF268Q14587 947 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 DNAAF3Q8N9W5 541 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 MECRQ9BV79 373 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 ZNF395Q9H8N7 513 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TXNDC16Q9P2K2 825 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms