RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 OTUD4Q01804 1114 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 SYCP2LQ5T4T6 812 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 ANGPTL8Q6UXH0 198 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SPOCD1Q6ZMY3 1216 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SV2AQ7L0J3 742 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 ZNF555Q8NEP9 628 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 CHST13Q8NET6 341 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SH3TC2Q8TF17 1288 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 KIF9Q9HAQ2 790 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 CHCHD3Q9NX63 227 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 TAGLN3Q9UI15 199 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 MYH1P12882 1939 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 LAMA4Q16363 1823 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SDR42E2A6NKP2 422 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 PDE2AO00408 941 aaPredicted RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 GRIN3BO60391 1043 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SYF2O95926 243 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 VCPP55072 806 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 PTK6Q13882 451 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 FASTKD5Q7L8L6 764 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 TMPRSS6Q8IU80 811 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 HOMEZQ8IX15 550 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 GPC2Q8N158 579 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 ATPAF2Q8N5M1 289 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 GMCL1P1Q8NEA9 526 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 TAS1R2Q8TE23 839 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 CCDC126Q96EE4 140 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 HPDLQ96IR7 371 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 LBHD1Q9BQE6 289 aaPredicted RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 CNPY3Q9BT09 278 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 RUBCNLQ9H714 662 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SAR1AQ9NR31 198 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 KIF17Q9P2E2 1029 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 PAIP2BQ9ULR5 123 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 LRCH1Q9Y2L9 728 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 DFFAO00273 331 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 ZNF197O14709 1029 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 VDRP11473 427 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 KCNA4P22459 653 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 RPL21P46778 160 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 GCNT1Q02742 428 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 MTDHQ86UE4 582 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 SPATA20Q8TB22 786 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 PDCD6IPQ8WUM4 868 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 SLC20A1Q8WUM9 679 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 TFB1MQ8WVM0 346 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 AGBL1Q96MI9 1066 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 CGRRF1Q99675 332 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SPON2Q9BUD6 331 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 TEX12Q9BXU0 123 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 DCLK3Q9C098 648 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 SARS2Q9NP81 518 aaKnown RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 PCDHGB4Q9UN71 923 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 C15orf41Q9Y2V0 281 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 FOCADQ5VW36 1801 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 DNALI1O14645 258 aaPredicted RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 MOCS2O96007 188 aaPredicted RBP8.7□□□□□ -1.02
VPS36-201ENST00000378060 MYL3P08590 195 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 CYP24A1Q07973 514 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 RASA2Q15283 850 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 FAM83EQ2M2I3 478 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 ABRAQ8N0Z2 381 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 TATDN2Q93075 761 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 ZDHHC15Q96MV8 337 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 TMEM39BQ9GZU3 492 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 IL17RBQ9NRM6 502 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 GPRC5DQ9NZD1 345 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 FAM198AQ9UFP1 575 aa8.7□□□□□ -1.02
VPS36-201ENST00000378060 STRNO43815 780 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 TLR2O60603 784 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 GRAP2O75791 330 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 PYGLP06737 847 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 HMOX2P30519 316 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 SMAD1Q15797 465 aaKnown RBP8.69□□□□□ -1.02
VPS36-201ENST00000378060 WDR59Q6PJI9 974 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 CRELD2Q6UXH1 353 aaPredicted RBP8.69□□□□□ -1.02
VPS36-201ENST00000378060 MCOLN2Q8IZK6 566 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 GALNT4Q8N4A0 578 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 ACTL9Q8TC94 416 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 RMDN1Q96DB5 314 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 ELMO2Q96JJ3 720 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 RPS6KL1Q9Y6S9 549 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 hCG_2014768A0A024R1R8 64 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 DDTLA6NHG4 134 aaPredicted RBP8.69□□□□□ -1.02
VPS36-201ENST00000378060 ANXA9O76027 345 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 PNPLA4P41247 253 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 AMPD2Q01433 879 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 PDAP1Q13442 181 aaKnown RBP8.69□□□□□ -1.02
VPS36-201ENST00000378060 COBLL1Q53SF7 1204 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 CYP4A22Q5TCH4 519 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 TMCO5AQ8N6Q1 288 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 AGBL3Q8NEM8 1001 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 DACH2Q96NX9 599 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 TAAR1Q96RJ0 339 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 SEPT3Q9UH03 358 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 ACTL7BQ9Y614 415 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 KANSL1LA0AUZ9 987 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 KLRC4O43908 158 aa8.69□□□□□ -1.02
VPS36-201ENST00000378060 SEC24DO94855 1032 aaPredicted RBP8.69□□□□□ -1.02
VPS36-201ENST00000378060 SLC25A27O95847 323 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms