RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 PAQR9Q6ZVX9 377 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 SV2AQ7L0J3 742 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 NUP93Q8N1F7 819 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 TMC2Q8TDI7 906 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 CCDC47Q96A33 483 aaKnown RBP15.13■□□□□ 0.01
NELFE-201ENST00000375425 TNIP3Q96KP6 325 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 SLITRK1Q96PX8 696 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 MED10Q9BTT4 135 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 SDCBP2Q9H190 292 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 CHORDC1Q9UHD1 332 aaPredicted RBP15.13■□□□□ 0.01
NELFE-201ENST00000375425 MAPK8IP1Q9UQF2 711 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 OAS1P00973 400 aaKnown RBP15.12■□□□□ 0.01
NELFE-201ENST00000375425 P4HA1P13674 534 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 PXNP49023 591 aaPredicted RBP15.12■□□□□ 0.01
NELFE-201ENST00000375425 PUM1Q14671 1186 aaKnown RBP eCLIP15.12■□□□□ 0.01
NELFE-201ENST00000375425 RSPO4Q2I0M5 234 aaPredicted RBP15.12■□□□□ 0.01
NELFE-201ENST00000375425 FBXO43Q4G163 708 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 C1orf220Q5T0J3 134 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 LAIR1Q6GTX8 287 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 ACOT1Q86TX2 421 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 WDR5BQ86VZ2 330 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 CD101Q93033 1021 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 GOLPH3LQ9H4A5 285 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 GDPD2Q9HCC8 539 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 PARD6AQ9NPB6 346 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 POLR3BQ9NW08 1133 aaPredicted RBP15.12■□□□□ 0.01
NELFE-201ENST00000375425 DLL3Q9NYJ7 618 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 USP18Q9UMW8 372 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 SLC8A2Q9UPR5 921 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 CPQQ9Y646 472 aa15.12■□□□□ 0.01
NELFE-201ENST00000375425 ZNF638Q14966 1978 aaKnown RBP15.12■□□□□ 0.01
NELFE-201ENST00000375425 OBSL1O75147 1896 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 A0A1W2PQ27 194 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 A0A1W2PQ64 194 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 A0A1W2PQD8 194 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 ZNF202O95125 648 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 RTN3O95197 1032 aaPredicted RBP15.11■□□□□ 0.01
NELFE-201ENST00000375425 NFATC1O95644 943 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 OLFM2O95897 454 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 RETP07949 1114 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 VAMP7P51809 220 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 SPEM2Q0P670 501 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 SPOPLQ6IQ16 392 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 KRBA2Q6ZNG9 492 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 DGLUCYQ7Z3D6 616 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 ADGRG2Q8IZP9 1017 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 SCAMP5Q8TAC9 235 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 TAF4BQ92750 862 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 EZH1Q92800 747 aaPredicted RBP15.11■□□□□ 0.01
NELFE-201ENST00000375425 FBXO32Q969P5 355 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 SMPD4Q9NXE4 827 aa15.11■□□□□ 0.01
NELFE-201ENST00000375425 KIF26AQ9ULI4 1882 aaPredicted RBP15.11■□□□□ 0.01
NELFE-201ENST00000375425 TNFRSF10BO14763 440 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 MAPK13O15264 365 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 AP1G2O75843 785 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 AKAP3O75969 853 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 ASS1P00966 412 aaKnown RBP15.1■□□□□ 0.01
NELFE-201ENST00000375425 NR2F2P24468 414 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 NDST1P52848 882 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 ORC1Q13415 861 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 NFIL3Q16649 462 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 CEP68Q76N32 757 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 FILIP1Q7Z7B0 1213 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 FAM35AQ86V20 835 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 FUKQ8N0W3 1084 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 CRYBG2Q8N1P7 616 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 RPLP0P6Q8NHW5 317 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.1■□□□□ 0.013e-9■■■■■ 65.2
NELFE-201ENST00000375425 ATP8B3O60423 1300 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 CEP250Q9BV73 2442 aa15.1■□□□□ 0.01
NELFE-201ENST00000375425 CCDC163A0A0D9SF12 145 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 PRR5-ARHGAP8B1AHC4 643 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 BEST1O76090 585 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 HLA-DRAP01903 254 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 MBL2P11226 248 aaPredicted RBP15.09■□□□□ 0.01
NELFE-201ENST00000375425 GCLMP48507 274 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 SLC5A3P53794 718 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 ARHGAP8P85298 464 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 ADAM9Q13443 819 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 UNC93AQ86WB7 457 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 GUF1Q8N442 669 aaKnown RBP15.09■□□□□ 0.01
NELFE-201ENST00000375425 CAMKK1Q8N5S9 505 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 KIAA1958Q8N8K9 716 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 C12orf29Q8N999 325 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 PDZD8Q8NEN9 1154 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 SLC2A14Q8TDB8 520 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 OVCA2Q8WZ82 227 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 SMARCD1Q96GM5 515 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 SMOQ99835 787 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 DMAP1Q9NPF5 467 aaPredicted RBP15.09■□□□□ 0.01
NELFE-201ENST00000375425 IL37Q9NZH6 218 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 CFAP97Q9P2B7 532 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 GREB1Q4ZG55 1949 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 ANAPC1Q9H1A4 1944 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 SCAMP3O14828 347 aaKnown RBP15.09■□□□□ 0.01
NELFE-201ENST00000375425 TRIM49P0CI25 452 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 TRIM49CP0CI26 452 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 KRT13P13646 458 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 CCDC130P13994 396 aa15.09■□□□□ 0.01
NELFE-201ENST00000375425 SDHBP21912 280 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms