RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PPEF2O14830 753 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 MICAL2O94851 1124 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 RHOP08100 348 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 EPB41P11171 864 aaKnown RBP11.01□□□□□ -0.65
COL5A1-202ENST00000371820 RFX1P22670 979 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 ALDH1A3P47895 512 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 TNNC1P63316 161 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 NTHL1P78549 312 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 PHLDB3Q6NSJ2 640 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 ZC3H3Q8IXZ2 948 aaKnown RBP11.01□□□□□ -0.65
COL5A1-202ENST00000371820 SYCE1Q8N0S2 351 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 SPATA4Q8NEY3 305 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 FAM76AQ8TAV0 307 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 SPATA18Q8TC71 538 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 C2orf15Q8WU43 125 aaKnown RBP11.01□□□□□ -0.65
COL5A1-202ENST00000371820 CAVIN3Q969G5 261 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 OSBPL9Q96SU4 736 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 FGFBP2Q9BYJ0 223 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 PCIF1Q9H4Z3 704 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 ASAH2Q9NR71 780 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 HCFC1R1Q9NWW0 138 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 GDE1Q9NZC3 331 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 ARHGAP20Q9P2F6 1191 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 DOCK6Q96HP0 2047 aa11.01□□□□□ -0.65
COL5A1-202ENST00000371820 TSC2P49815 1807 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 GTPBP10A4D1E9 387 aaKnown RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 GOLGA8IPA6NC78 632 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 GOLGA6BA6NDN3 693 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 GOLGA8JA6NMD2 632 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 SRRM3A6NNA2 597 aaPredicted RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 STK25O00506 426 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 CYB561D2O14569 222 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 HUS1O60921 280 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 SEC24AO95486 1093 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 FGF19O95750 216 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 TNNC2P02585 160 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 ITGB3P05106 788 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 POLR2BP30876 1174 aaKnown RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 TUFMP49411 452 aaKnown RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 EPHB3P54753 998 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 NAP1L1P55209 391 aaKnown RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 RBP5P82980 135 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 TSPY1Q01534 308 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 PFKPQ01813 784 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 TWF1Q12792 350 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 MYO1EQ12965 1108 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 ADAM9Q13443 819 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 VEPH1Q14D04 833 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 SLC18A3Q16572 532 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 NFIL3Q16649 462 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 BMT2Q1RMZ1 405 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 ASTE1Q2TB18 679 aaPredicted RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 RNF19BQ6ZMZ0 732 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 EPM2AIP1Q7L775 607 aaPredicted RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 ITIH5Q86UX2 942 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 CREG2Q8IUH2 290 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 TRIM59Q8IWR1 403 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 NPAS3Q8IXF0 933 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 DCP1BQ8IZD4 617 aaKnown RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 NOA1Q8NC60 698 aaKnown RBP11□□□□□ -0.65
COL5A1-202ENST00000371820 ITFG1Q8TB96 612 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 WHAMMQ8TF30 809 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 FGF14Q92915 247 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 FNBP1Q96RU3 617 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 CORO1BQ9BR76 489 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 GPR88Q9GZN0 384 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 LACRTQ9GZZ8 138 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 IKZF4Q9H2S9 585 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 HSPBP1Q9NZL4 362 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 DLGAP2Q9P1A6 1054 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 STIM2Q9P246 746 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 HPCAL4Q9UM19 191 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 AGAP1Q9UPQ3 857 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 YIPF1Q9Y548 306 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 ASB3Q9Y575 518 aa11□□□□□ -0.65
COL5A1-202ENST00000371820 MTMR11A4FU01 709 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 LRRC53A6NM62 1247 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 ENC1O14682 589 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 SPTLC1O15269 473 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 SLC16A3O15427 465 aaKnown RBP10.99□□□□□ -0.65
COL5A1-202ENST00000371820 KRT19P08727 400 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 MYL7Q01449 175 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 BFSP1Q12934 665 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 ASIC2Q16515 512 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 NFE2Q16621 373 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-202ENST00000371820 KNOP1Q1ED39 458 aaKnown RBP10.99□□□□□ -0.65
COL5A1-202ENST00000371820 DUOXA2Q1HG44 320 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 ZCWPW2Q504Y3 356 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 TDRD12Q587J7 1177 aaKnown RBP10.99□□□□□ -0.65
COL5A1-202ENST00000371820 DNAJC21Q5F1R6 531 aaKnown RBP10.99□□□□□ -0.65
COL5A1-202ENST00000371820 PARM1Q6UWI2 310 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 WDR49Q8IV35 697 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 C12orf56Q8IXR9 622 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 TMEM86AQ8N2M4 240 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 ARFGAP2Q8N6H7 521 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 C1orf127Q8N9H9 656 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 XXYLT1Q8NBI6 393 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 ST13P5Q8NFI4 369 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-202ENST00000371820 SPPL2BQ8TCT7 592 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms