RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 USP41Q3LFD5 358 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 LILRA2Q8N149 483 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ANKRD35Q8N283 1001 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 MCUR1Q96AQ8 359 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 CCDC77Q9BR77 488 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PIH1D1Q9NWS0 290 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 BTBD7Q9P203 1132 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 POLLQ9UGP5 575 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 EXOC1LA0A1B0GW35 172 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 EML1O00423 815 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 FBP2O00757 339 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 STRNO43815 780 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 FKBP6O75344 327 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 LMNB1P20700 586 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 STIP1P31948 543 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 FMO5P49326 533 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 KPNA1P52294 538 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 YWHAGP61981 247 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PPP2R5EQ16537 467 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 IZUMO3Q5VZ72 239 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 FAM91A1Q658Y4 838 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 AMIGO2Q86SJ2 522 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 SLC47A2Q86VL8 602 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 IGDCC3Q8IVU1 814 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 THNSL1Q8IYQ7 743 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PPFIBP2Q8ND30 876 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 DCAKDQ8WVC6 231 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 TTC17Q96AE7 1141 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 CEP170P1Q96L14 293 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 MMP19Q99542 508 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 HEPHQ9BQS7 1158 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 CBWD1Q9BRT8 395 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 OSBPL8Q9BZF1 889 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 MIS12Q9H081 205 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 SAYSD1Q9NPB0 183 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 SEPT9Q9UHD8 586 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PCDHB4Q9Y5E5 795 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ROBO3Q96MS0 1386 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ARHGAP42A6NI28 874 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 MTA2O94776 668 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 POLR2MP0CAP2 368 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 THRAP10827 490 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ESRRAP11474 423 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PLS3P13797 630 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 NAT1P18440 290 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 NFKBIAP25963 317 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 MTTPP55157 894 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 TFAMQ00059 246 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PDIA2Q13087 525 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 GRAPQ13588 217 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 WDR44Q5JSH3 913 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 SPOPLQ6IQ16 392 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 NANOGP8Q6NSW7 305 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PGM2L1Q6PCE3 622 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 OLFML1Q6UWY5 402 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 MAVSQ7Z434 540 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 AMIGO3Q86WK7 504 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 TICAM1Q8IUC6 712 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 GRAPLQ8TC17 118 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PRPF31Q8WWY3 499 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 STMN2Q93045 179 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 HNRNPABQ99729 332 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 NUP85Q9BW27 656 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 MANSC1Q9H8J5 431 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 RNF11Q9Y3C5 154 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 TCRBV7S3A2A0A539 114 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 CYB561D2O14569 222 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 TRMUO75648 421 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ZWINTO95229 277 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 OXSR1O95747 527 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ATF2P15336 505 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 NELFEP18615 380 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ANXA13P27216 316 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 PMLP29590 882 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 SSTR1P30872 391 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ARRB2P32121 409 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ARL1P40616 181 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 FMO1Q01740 532 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 EN1Q05925 392 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 DCTN2Q13561 401 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ITGA9Q13797 1035 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 LPIN1Q14693 890 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 STAT4Q14765 748 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 CCNG2Q16589 344 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ATP13A4Q4VNC1 1196 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 FNBP1LQ5T0N5 605 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 FAXCQ5TGI0 409 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ANKRD22Q5VYY1 191 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 TMEM270Q6UE05 265 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ADGRG6Q86SQ4 1221 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 IFNLR1Q8IU57 520 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 MARVELD2Q8N4S9 558 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 SYT2Q8N9I0 419 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 NEDD1Q8NHV4 660 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNF398Q8TD17 642 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 TRAIPQ9BWF2 469 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 INTS2Q9H0H0 1204 aaKnown RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 GINM1Q9NU53 330 aa9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 LARSQ9P2J5 1176 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms