RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 TREML2Q5T2D2 321 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 EEPD1Q7L9B9 569 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 TMEM192Q8IY95 271 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 CYTH2Q99418 400 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 ELOVL4Q9GZR5 314 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 RSAD1Q9HA92 442 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 KANSL3Q9P2N6 904 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 USP18Q9UMW8 372 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 WDR90Q96KV7 1748 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 GOLGA8RI6L899 631 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 RNF8O76064 485 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 ENDOD1O94919 500 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 ATP2A2P16615 1042 aaKnown RBP18.46■□□□□ 0.55
GYPC-202ENST00000356887 RASSF2P50749 326 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 MTM1Q13496 603 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 TAF1BQ53T94 588 aaPredicted RBP18.46■□□□□ 0.55
GYPC-202ENST00000356887 LONP2Q86WA8 852 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 CDR2LQ86X02 465 aaPredicted RBP18.46■□□□□ 0.55
GYPC-202ENST00000356887 TRIM50Q86XT4 487 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 C1orf127Q8N9H9 656 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 SPATA18Q8TC71 538 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 KLF6Q99612 283 aaPredicted RBP18.46■□□□□ 0.55
GYPC-202ENST00000356887 TBC1D10AQ9BXI6 508 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 CDT1Q9H211 546 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 C12orf65Q9H3J6 166 aaKnown RBP18.46■□□□□ 0.55
GYPC-202ENST00000356887 SMYD3Q9H7B4 428 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 MANSC1Q9H8J5 431 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 RPF1Q9H9Y2 349 aaKnown RBP18.46■□□□□ 0.55
GYPC-202ENST00000356887 SAR1AQ9NR31 198 aa18.46■□□□□ 0.55
GYPC-202ENST00000356887 ANKRD33BA6NCL7 494 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 ARIH2O95376 493 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 CBX6O95503 412 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 MT-ND3P03897 115 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 CXCL8P10145 99 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 TROVE2P10155 538 aaKnown RBP eCLIP18.45■□□□□ 0.54
GYPC-202ENST00000356887 STIP1P31948 543 aaKnown RBP18.45■□□□□ 0.54
GYPC-202ENST00000356887 ELK3P41970 407 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 BASP1P80723 227 aaKnown RBP18.45■□□□□ 0.54
GYPC-202ENST00000356887 CRYMQ14894 314 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 ZNF449Q6P9G9 518 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 PLPPR4Q7Z2D5 763 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 TMEM130Q8N3G9 435 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 FAM13CQ8NE31 585 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 ZNF668Q96K58 619 aaPredicted RBP18.45■□□□□ 0.54
GYPC-202ENST00000356887 ZNF570Q96NI8 536 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 PEBP4Q96S96 227 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 CALN1Q9BXU9 219 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 ASNSD1Q9NWL6 643 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 SLC5A4Q9NY91 659 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 HMGXB4Q9UGU5 601 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 ZFP69BQ9UJL9 534 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 CHMP2BQ9UQN3 213 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 INO80B-WBP1J3KQ70 363 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 CILPO75339 1184 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 GJB1P08034 283 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 NFICP08651 508 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 PCK1P35558 622 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 NRLP54845 237 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 CBLBQ13191 982 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 MMRN1Q13201 1228 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 NOMO1Q15155 1222 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 HSDL1Q3SXM5 330 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 NPNTQ6UXI9 565 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 SH2D5Q6ZV89 423 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 RFWD2Q8NHY2 731 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 TMEM176AQ96HP8 235 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 INO80BQ9C086 356 aaPredicted RBP18.45■□□□□ 0.54
GYPC-202ENST00000356887 TLE6Q9H808 572 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 NKX1-2Q9UD57 310 aaPredicted RBP18.45■□□□□ 0.54
GYPC-202ENST00000356887 LNPEPQ9UIQ6 1025 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.45■□□□□ 0.545e-6■■□□□ 11.8
GYPC-202ENST00000356887 TNFSF13BQ9Y275 285 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 TEX264Q9Y6I9 313 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 NUMBLQ9Y6R0 609 aa18.45■□□□□ 0.54
GYPC-202ENST00000356887 LACTBL1A8MY62 500 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 DHRS4L1P0CG22 281 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 GPD2P43304 727 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 NEK3P51956 506 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 ROR1Q01973 937 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 SLC18A2Q05940 514 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 MBTD1Q05BQ5 628 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 KCNJ11Q14654 390 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 CTC1Q2NKJ3 1217 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 DARS2Q6PI48 645 aaKnown RBP18.44■□□□□ 0.54
GYPC-202ENST00000356887 CYP4V2Q6ZWL3 525 aaPredicted RBP18.44■□□□□ 0.54
GYPC-202ENST00000356887 MTDHQ86UE4 582 aaKnown RBP18.44■□□□□ 0.54
GYPC-202ENST00000356887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.54
GYPC-202ENST00000356887 CXorf38Q8TB03 319 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 SLC44A1Q8WWI5 657 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 MIEF2Q96C03 454 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 NLRP4Q96MN2 994 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 ADPGKQ9BRR6 497 aa18.44■□□□□ 0.54
GYPC-202ENST00000356887 IQANK1A0A1B0GTG1 560 aa18.43■□□□□ 0.54
GYPC-202ENST00000356887 PEX11AO75192 247 aa18.43■□□□□ 0.54
GYPC-202ENST00000356887 GNAZP19086 355 aa18.43■□□□□ 0.54
GYPC-202ENST00000356887 PTPN4P29074 926 aa18.43■□□□□ 0.54
GYPC-202ENST00000356887 ZNF143P52747 638 aaPredicted RBP18.43■□□□□ 0.54
GYPC-202ENST00000356887 TMEM132AQ24JP5 1023 aa18.43■□□□□ 0.54
GYPC-202ENST00000356887 CELF3Q5SZQ8 465 aaKnown RBP18.43■□□□□ 0.54
GYPC-202ENST00000356887 CLNKQ7Z7G1 428 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms