RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 KLRC4O43908 158 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 LRP3O75074 770 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 MBL2P11226 248 aaPredicted RBP20.67■□□□□ 0.9
ITGA4-202ENST00000339307 PFKFB1P16118 471 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 KCNA4P22459 653 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 YWHAQP27348 245 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 AP3M2P53677 418 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 CCDC6Q16204 474 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 CSRP2Q16527 193 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 CEP135Q66GS9 1140 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 PRR23CQ6ZRP0 262 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 FILIP1Q7Z7B0 1213 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 NUP93Q8N1F7 819 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 CAMKK1Q8N5S9 505 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 KIAA0895Q8NCT3 520 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 PARD3BQ8TEW8 1205 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 SPATA32Q96LK8 384 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 TTLL2Q9BWV7 592 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 ARRDC1-AS1Q9H2J1 176 aa20.67■□□□□ 0.9
ITGA4-202ENST00000339307 STAU1O95793 577 aaKnown RBP20.66■□□□□ 0.9
ITGA4-202ENST00000339307 PFKLP17858 780 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 ZXDBP98169 803 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 KBTBD6Q86V97 674 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 NETO1Q8TDF5 533 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 FBXO32Q969P5 355 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 ACDQ96AP0 544 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 TNIP3Q96KP6 325 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 KCNK16Q96T55 309 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.66■□□□□ 0.9
ITGA4-202ENST00000339307 TMEM30AQ9NV96 361 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 CFAP97Q9P2B7 532 aa20.66■□□□□ 0.9
ITGA4-202ENST00000339307 CHORDC1Q9UHD1 332 aaPredicted RBP20.66■□□□□ 0.9
ITGA4-202ENST00000339307 NR3C1P04150 777 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 P4HA1P13674 534 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 DLG4P78352 724 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 ORC1Q13415 861 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 DMC1Q14565 340 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 C2orf27AQ580R0 203 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 TTC30AQ86WT1 665 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 C12orf50Q8NA57 414 aaPredicted RBP20.65■□□□□ 0.9
ITGA4-202ENST00000339307 CHAMP1Q96JM3 812 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 FRMD4BQ9Y2L6 1034 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 CEP250Q9BV73 2442 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 RALGAPA1Q6GYQ0 2036 aa20.65■□□□□ 0.9
ITGA4-202ENST00000339307 SLC9A3R1O14745 358 aaPredicted RBP20.64■□□□□ 0.89
ITGA4-202ENST00000339307 GDF9O60383 454 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 RTN3O95197 1032 aaPredicted RBP20.64■□□□□ 0.89
ITGA4-202ENST00000339307 C4BPAP04003 597 aaKnown RBP20.64■□□□□ 0.89
ITGA4-202ENST00000339307 TCF3P15923 654 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 DGKEP52429 567 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 SLC7A9P82251 487 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 AASDHQ4L235 1098 aaPredicted RBP20.64■□□□□ 0.89
ITGA4-202ENST00000339307 SYT13Q7L8C5 426 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 ACOT1Q86TX2 421 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 FAM35AQ86V20 835 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 CCDC26Q8TAB7 109 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 CCDC47Q96A33 483 aaKnown RBP20.64■□□□□ 0.89
ITGA4-202ENST00000339307 NACA2Q9H009 215 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 USP25Q9UHP3 1055 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 PTPRDP23468 1912 aa20.64■□□□□ 0.89
ITGA4-202ENST00000339307 CCDC163A0A0D9SF12 145 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 CALUO43852 315 aaPredicted RBP20.63■□□□□ 0.89
ITGA4-202ENST00000339307 APBB3O95704 486 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 RPN1P04843 607 aaKnown RBP20.63■□□□□ 0.89
ITGA4-202ENST00000339307 CMA1P23946 247 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 KRT85P78386 507 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 SGSM1Q2NKQ1 1148 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 PDZD8Q8NEN9 1154 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 TSTD1Q8NFU3 115 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 SCAMP5Q8TAC9 235 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 EZH1Q92800 747 aaPredicted RBP20.63■□□□□ 0.89
ITGA4-202ENST00000339307 SDCBP2Q9H190 292 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 KRT82Q9NSB4 513 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 DMAC2Q9NW81 257 aa20.63■□□□□ 0.89
ITGA4-202ENST00000339307 HELZP42694 1942 aaKnown RBP20.63■□□□□ 0.89
ITGA4-202ENST00000339307 PDXKO00764 312 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 AP1G2O75843 785 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 VNN1O95497 513 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 OAS1P00973 400 aaKnown RBP20.62■□□□□ 0.89
ITGA4-202ENST00000339307 CYP17A1P05093 508 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 GBP1P32455 592 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 PIK3CAP42336 1068 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 SYKP43405 635 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 DHCR24Q15392 516 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 DDX42Q86XP3 938 aaKnown RBP eCLIP20.62■□□□□ 0.89
ITGA4-202ENST00000339307 SLC9A9Q8IVB4 645 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 ADGRG2Q8IZP9 1017 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 CCDC33Q8N5R6 958 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 SMARCD1Q96GM5 515 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 KCTD10Q9H3F6 313 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 VRTNQ9H8Y1 702 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 DMAP1Q9NPF5 467 aaPredicted RBP20.62■□□□□ 0.89
ITGA4-202ENST00000339307 MAPK8IP1Q9UQF2 711 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 INVSQ9Y283 1065 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 DNAH14Q0VDD8 3507 aa20.62■□□□□ 0.89
ITGA4-202ENST00000339307 DCLK1O15075 740 aa20.61■□□□□ 0.89
ITGA4-202ENST00000339307 FOXD2O60548 495 aaPredicted RBP20.61■□□□□ 0.89
ITGA4-202ENST00000339307 KIF20AO95235 890 aa20.61■□□□□ 0.89
ITGA4-202ENST00000339307 CCDC130P13994 396 aa20.61■□□□□ 0.89
ITGA4-202ENST00000339307 TRIM21P19474 475 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms