RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 USP18Q9UMW8 372 aa18.62■□□□□ 0.57
IFFO1-201ENST00000336604 APOC4-APOC2K7ER74 178 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 MED7O43513 233 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 AP1G2O75843 785 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 APOC2P02655 101 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 KLHL38Q2WGJ6 581 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 NLRP9Q7RTR0 991 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 MTDHQ86UE4 582 aaKnown RBP18.61■□□□□ 0.57
IFFO1-201ENST00000336604 C1orf127Q8N9H9 656 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 BANPQ8N9N5 519 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 SLC4A11Q8NBS3 891 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 SSU72Q9NP77 194 aaKnown RBP18.61■□□□□ 0.57
IFFO1-201ENST00000336604 FETUBQ9UGM5 382 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 LINGO3P0C6S8 592 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 BLMHQ13867 455 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 DPYSL3Q14195 570 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 DLK2Q6UY11 383 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 CMASQ8NFW8 434 aaPredicted RBP18.61■□□□□ 0.57
IFFO1-201ENST00000336604 PEBP4Q96S96 227 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 SH3GL3Q99963 347 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 TBC1D10AQ9BXI6 508 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 GGA3Q9NZ52 723 aa18.61■□□□□ 0.57
IFFO1-201ENST00000336604 NKX1-2Q9UD57 310 aaPredicted RBP18.61■□□□□ 0.57
IFFO1-201ENST00000336604 ACKR2O00590 384 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 MCF2LO15068 1137 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 AVILO75366 819 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 ATP5HO75947 161 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 EPHB2P29323 1055 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 ELK3P41970 407 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 RFWD2Q8NHY2 731 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 BCO2Q9BYV7 579 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 ELOVL4Q9GZR5 314 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 M0QYV0 167 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 NOP56O00567 594 aaKnown RBP18.6■□□□□ 0.57
IFFO1-201ENST00000336604 RNF8O76064 485 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 ITGB3P05106 788 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 GM2AP17900 193 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 CLCN3P51790 818 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 PTPN11Q06124 597 aaPredicted RBP18.6■□□□□ 0.57
IFFO1-201ENST00000336604 PARP6Q2NL67 630 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 FAM102AQ5T9C2 384 aaPredicted RBP18.6■□□□□ 0.57
IFFO1-201ENST00000336604 FYB2Q5VWT5 728 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 DEFB132Q7Z7B7 95 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 FAM13CQ8NE31 585 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 FAM167AQ96KS9 214 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 GPR20Q99678 358 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 FRMD8P1Q9BZ68 369 aaPredicted RBP18.6■□□□□ 0.57
IFFO1-201ENST00000336604 PHACTR1Q9C0D0 580 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 ASCC2Q9H1I8 757 aaPredicted RBP18.6■□□□□ 0.57
IFFO1-201ENST00000336604 CDT1Q9H211 546 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.6■□□□□ 0.57
IFFO1-201ENST00000336604 ZFP69BQ9UJL9 534 aa18.6■□□□□ 0.57
IFFO1-201ENST00000336604 IGKV6-21A0A0C4DH24 114 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 TCRBV9S1A1TA0A576 114 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 MICAL2O94851 1124 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 KBTBD12Q3ZCT8 623 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 APOBEC3FQ8IUX4 373 aaKnown RBP18.59■□□□□ 0.57
IFFO1-201ENST00000336604 AGGF1Q8N302 714 aaeCLIP18.59■□□□□ 0.57
IFFO1-201ENST00000336604 NAF1Q96HR8 494 aaKnown RBP18.59■□□□□ 0.57
IFFO1-201ENST00000336604 PIWIL1Q96J94 861 aaKnown RBP18.59■□□□□ 0.57
IFFO1-201ENST00000336604 KANSL3Q9P2N6 904 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 SSC5DA1L4H1 1573 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 A0A0G2JND7 137 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 KBTBD13C9JR72 458 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 C2CD2LO14523 706 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 TRUB2O95900 331 aaKnown RBP18.59■□□□□ 0.57
IFFO1-201ENST00000336604 PGK2P07205 417 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 PDHA1P08559 390 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 TGFB3P10600 412 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 LRRC6Q86X45 466 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 UBA3Q8TBC4 463 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 SERAC1Q96JX3 654 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 C2orf40Q9H1Z8 148 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 FZD8Q9H461 694 aa18.59■□□□□ 0.57
IFFO1-201ENST00000336604 RPF1Q9H9Y2 349 aaKnown RBP18.59■□□□□ 0.57
IFFO1-201ENST00000336604 CDH6P55285 790 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 PTK7Q13308 1070 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 CDO1Q16878 200 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 SLC45A4Q5BKX6 768 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 ZC3H12AQ5D1E8 599 aaKnown RBP18.58■□□□□ 0.57
IFFO1-201ENST00000336604 DARS2Q6PI48 645 aaKnown RBP18.58■□□□□ 0.57
IFFO1-201ENST00000336604 CLNKQ7Z7G1 428 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 LONP2Q86WA8 852 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 INPP5DQ92835 1189 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 PPP1R16BQ96T49 567 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 CYTH2Q99418 400 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 MANSC1Q9H8J5 431 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 ZFATQ9P243 1243 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 WDR35Q9P2L0 1181 aa18.58■□□□□ 0.57
IFFO1-201ENST00000336604 GPR25O00155 361 aa18.58■□□□□ 0.56
IFFO1-201ENST00000336604 TM9SF1O15321 606 aa18.58■□□□□ 0.56
IFFO1-201ENST00000336604 GRAP2O75791 330 aa18.58■□□□□ 0.56
IFFO1-201ENST00000336604 GCLCP48506 637 aaPredicted RBP18.58■□□□□ 0.56
IFFO1-201ENST00000336604 C15orf59Q2T9L4 293 aaPredicted RBP18.58■□□□□ 0.56
IFFO1-201ENST00000336604 TRNP1Q6NT89 227 aa18.58■□□□□ 0.56
IFFO1-201ENST00000336604 RIOX2Q8IUF8 465 aa18.58■□□□□ 0.56
IFFO1-201ENST00000336604 ADPGKQ9BRR6 497 aa18.58■□□□□ 0.56
IFFO1-201ENST00000336604 MAF1Q9H063 256 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms