RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PTAR1Q7Z6K3 402 aaPredicted RBP17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 SGMS1Q86VZ5 419 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 VCPKMTQ9H867 229 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 VWA5AO00534 786 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 KRT16P08779 473 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 TMEM253P0C7T8 217 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 ANTXR2P58335 489 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 ZNF543Q08ER8 600 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 LLGL2Q6P1M3 1020 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 ROPN1BQ9BZX4 212 aaPredicted RBP17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 WDCPQ9H6R7 721 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 RSAD1Q9HA92 442 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 ROPN1Q9HAT0 212 aaPredicted RBP17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 CYP2R1Q6VVX0 501 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 BNC2Q6ZN30 1099 aaPredicted RBP17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 DEFB107AQ8IZN7 70 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 EMC1Q8N766 993 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 MTMR12Q9C0I1 747 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 TMBIM4Q9HC24 238 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 CDHR2Q9BYE9 1310 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 GOLGA8TH3BQL2 631 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 LTFP02788 710 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 RGS4P49798 205 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 FAM83EQ2M2I3 478 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 KDM7AQ6ZMT4 941 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 STRA8Q7Z7C7 330 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 GINS4Q9BRT9 223 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 DDIT4Q9NX09 232 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 TBC1D12O60347 775 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 PON1P27169 355 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 PDIA5Q14554 519 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 SNX30Q5VWJ9 437 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 IFNLR1Q8IU57 520 aaPredicted RBP17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 TBC1D19Q8N5T2 526 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 EXD1Q8NHP7 514 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 FAM129AQ9BZQ8 928 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 PDZK1P1A8MUH7 402 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 CLPTM1O96005 669 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 DARSP14868 501 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 HERVK_113P62684 666 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ACAP1Q15027 740 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 MFSD14CQ5VZR4 134 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 SLC47A2Q86VL8 602 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 SYTL1Q8IYJ3 562 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ATG16L2Q8NAA4 619 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 SLC20A1Q8WUM9 679 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ZNF333Q96JL9 665 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 KATNAL1Q9BW62 490 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 TMEM8AQ9HCN3 771 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ITGA4P13612 1032 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 AP3M2P53677 418 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 DGKDQ16760 1214 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ACAD10Q6JQN1 1059 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 MAGEB18Q96M61 343 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 PAIP1Q9H074 479 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 CDC42EP4Q9H3Q1 356 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 TRIM39Q9HCM9 518 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 PAPOLBQ9NRJ5 636 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 A8MX80 341 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 TRIM13O60858 407 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ADSLP30566 484 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 TCEA2Q15560 299 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 AGKQ53H12 422 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 MARK4Q96L34 752 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 RBBP8Q99708 897 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 TRIM62Q9BVG3 475 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 FUT8Q9BYC5 575 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 CATSPERBQ9H7T0 1116 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 LSM7Q9UK45 103 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 PSMD3O43242 534 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 RPS6KA5O75582 802 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 TP53BP2Q13625 1128 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ZCCHC23Q6ZST2 131 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 LPCAT2Q7L5N7 544 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 SUGP1Q8IWZ8 645 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 MMGT1Q8N4V1 131 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ACOX2Q99424 681 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 EPB41L4AQ9HCS5 686 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 KLHL1Q9NR64 748 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 PRR12Q9ULL5 1215 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 PTGES3LE9PB15 166 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 FAM20BO75063 409 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 ALDH9A1P49189 494 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 CACNA2D1P54289 1103 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 VAC14Q08AM6 782 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 KLHL17Q6TDP4 642 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 PAFAH2Q99487 392 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 TEX13BQ9BXU2 312 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 VTA1Q9NP79 307 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 PADI4Q9UM07 663 aa17.36■□□□□ 0.37
TSPAN3-201ENST00000267970 TRPC5OSA6NMA1 111 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 DSG3P32926 999 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 SCFD2Q8WU76 684 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 KCTD14Q9BQ13 255 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 EIF3LQ9Y262 564 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 SNPHO15079 494 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 ACADSP16219 412 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms